RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 CIB1Q99828 191 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 MLPHQ9BV36 600 aaPredicted RBP8.72□□□□□ -1.01
LIG4-204ENST00000611712 CLPBQ9H078 707 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 GMIPQ9P107 970 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 PRRG1O14668 218 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 NPHS1O60500 1241 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 TIPRLO75663 272 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 RTN3O95197 1032 aaPredicted RBP8.72□□□□□ -1.01
LIG4-204ENST00000611712 GUCA1CO95843 209 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 KPNA1P52294 538 aaPredicted RBP8.72□□□□□ -1.01
LIG4-204ENST00000611712 HNRNPDQ14103 355 aaKnown RBP8.72□□□□□ -1.01
LIG4-204ENST00000611712 FBXO48Q5FWF7 155 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 B3GNT6Q6ZMB0 384 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 ZNF534Q76KX8 674 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 HERC6Q8IVU3 1022 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 CFAP52Q8N1V2 620 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 OR56A4Q8NGH8 313 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 NRG4Q8WWG1 115 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 FAM162AQ96A26 154 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 EMID1Q96A84 441 aaPredicted RBP8.72□□□□□ -1.01
LIG4-204ENST00000611712 HMCESQ96FZ2 354 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 NSMCE2Q96MF7 247 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 RNF145Q96MT1 663 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 ACOX2Q99424 681 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 OSBPL2Q9H1P3 480 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 NOL11Q9H8H0 719 aaKnown RBP8.72□□□□□ -1.01
LIG4-204ENST00000611712 SMPD4Q9NXE4 827 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 VPS28Q9UK41 221 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 COPG1Q9Y678 874 aaKnown RBP8.72□□□□□ -1.01
LIG4-204ENST00000611712 A0A0J9YYE9 177 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 CAPN14A8MX76 684 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 FESP07332 822 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 FCGR1AP12314 374 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 RECQLP46063 649 aaPredicted RBP8.72□□□□□ -1.01
LIG4-204ENST00000611712 RHOAP61586 193 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 CDH18Q13634 790 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 GRB14Q14449 540 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 MTX3Q5HYI7 312 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 TMTC4Q5T4D3 741 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 SPRYD7Q5W111 196 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 GPSM1Q86YR5 675 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 CAMK1DQ8IU85 385 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 MYO1HQ8N1T3 1032 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 CARNMT1Q8N4J0 409 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 ZNF555Q8NEP9 628 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 OR4L1Q8NH43 312 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 RAET1EQ8TD07 263 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 KHSRPQ92945 711 aaKnown RBP eCLIP8.72□□□□□ -1.01
LIG4-204ENST00000611712 PSMG2Q969U7 264 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 DGCR14Q96DF8 476 aaKnown RBP8.72□□□□□ -1.01
LIG4-204ENST00000611712 C19orf60Q96EN9 201 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 HAPLN3Q96S86 360 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 KIFC1Q9BW19 673 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 PCDHAC1Q9H158 963 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 UNC93B1Q9H1C4 597 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 TAF1LQ8IZX4 1826 aa8.72□□□□□ -1.01
LIG4-204ENST00000611712 MEIS3P2A8K0S8 358 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 ZBTB14O43829 449 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 LDLRP01130 860 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 HNRNPCP07910 306 aaKnown RBP eCLIP8.71□□□□□ -1.01
LIG4-204ENST00000611712 HIST1H2AGP0C0S8 130 aaPredicted RBP8.71□□□□□ -1.01
LIG4-204ENST00000611712 RHOQP17081 205 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 HIST1H2ADP20671 130 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 GRK4P32298 578 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 NR1H2P55055 460 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 IL2P60568 153 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 TRIM25Q14258 630 aaKnown RBP8.71□□□□□ -1.01
LIG4-204ENST00000611712 ACAP2Q15057 778 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 MARCH8Q5T0T0 291 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 RBM20Q5T481 1227 aaKnown RBP8.71□□□□□ -1.01
LIG4-204ENST00000611712 CWF19L1Q69YN2 538 aaKnown RBP8.71□□□□□ -1.01
LIG4-204ENST00000611712 FAM126BQ8IXS8 530 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 CASP10Q92851 521 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 HIST1H2AHQ96KK5 128 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 HIST1H2AJQ99878 128 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 H2AFJQ9BTM1 129 aa8.71□□□□□ -1.01
LIG4-204ENST00000611712 OR51F1A6NGY5 319 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 SCAMP3O14828 347 aaKnown RBP8.71□□□□□ -1.02
LIG4-204ENST00000611712 MAP3K13O43283 966 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 FGF1P05230 155 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 HLA-DPA1P20036 260 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 TAF10Q12962 218 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 ADGRE1Q14246 886 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 NAPRTQ6XQN6 538 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 RPS27LQ71UM5 84 aaKnown RBP8.71□□□□□ -1.02
LIG4-204ENST00000611712 SATL1Q86VE3 508 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 CIR1Q86X95 450 aaPredicted RBP8.71□□□□□ -1.02
LIG4-204ENST00000611712 CLVS1Q8IUQ0 354 aaPredicted RBP8.71□□□□□ -1.02
LIG4-204ENST00000611712 SMG8Q8ND04 991 aaKnown RBP8.71□□□□□ -1.02
LIG4-204ENST00000611712 RSPH1Q8WYR4 309 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 GFM2Q969S9 779 aaKnown RBP8.71□□□□□ -1.02
LIG4-204ENST00000611712 DCUN1D5Q9BTE7 237 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 C9orf16Q9BUW7 83 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 BPIFA1Q9NP55 256 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 TRPM5Q9NZQ8 1165 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 EMCNQ9ULC0 261 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 EIF3LQ9Y262 564 aaKnown RBP8.71□□□□□ -1.02
LIG4-204ENST00000611712 LY75O60449 1722 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 LOXHD1Q8IVV2 1947 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 DHRS12A0PJE2 317 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms