RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 FGF1P05230 155 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 BGNP21810 368 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 DDX6P26196 483 aaKnown RBP eCLIP12.38□□□□□ -0.43
TP53-219ENST00000610538 MESP2Q0VG99 397 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 USP10Q14694 798 aaKnown RBP12.38□□□□□ -0.43
TP53-219ENST00000610538 DUSP6Q16828 381 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 NCEH1Q6PIU2 408 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 GLT6D1Q7Z4J2 308 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 SPATS2Q86XZ4 545 aaKnown RBP12.38□□□□□ -0.43
TP53-219ENST00000610538 SLC41A1Q8IVJ1 513 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 SUGP1Q8IWZ8 645 aaKnown RBP12.38□□□□□ -0.43
TP53-219ENST00000610538 OR4K2Q8NGD2 314 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 BRSK1Q8TDC3 778 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 CYB5D2Q8WUJ1 264 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 FGF13Q92913 245 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 SEC16BQ96JE7 1060 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 EBF3Q9H4W6 596 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 CCDC134Q9H6E4 229 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 ZNF395Q9H8N7 513 aaPredicted RBP12.38□□□□□ -0.43
TP53-219ENST00000610538 HAUS2Q9NVX0 235 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 PRKAG3Q9UGI9 489 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 DPP7Q9UHL4 492 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 ANKRD36A6QL64 1941 aa12.38□□□□□ -0.43
TP53-219ENST00000610538 A0A096LPK6 155 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 OTOL1A6NHN0 477 aaPredicted RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 GPR39O43194 453 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 ZNF821O75541 412 aaPredicted RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 CNTFP26441 200 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 LIG3P49916 1009 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 OVGP1Q12889 678 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 PDK4Q16654 411 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 LRRC73Q5JTD7 316 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 FAM78AQ5JUQ0 283 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 N4BP2L1Q5TBK1 243 aaPredicted RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 GKAP1Q5VSY0 366 aaPredicted RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 TMEM215Q68D42 235 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 PDE12Q6L8Q7 609 aaKnown RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 ZCCHC23Q6ZST2 131 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 ZNF366Q8N895 744 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 PTCD2Q8WV60 388 aaKnown RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 ACDQ96AP0 544 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 ASIC4Q96FT7 647 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 SAMD11Q96NU1 681 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 MTG2Q9H4K7 406 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 SSU72Q9NP77 194 aaKnown RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 TMEM216Q9P0N5 145 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 MTF2Q9Y483 593 aaPredicted RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 ATXN2Q99700 1313 aaKnown RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 GOT2P00505 430 aaKnown RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 C2P06681 752 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 GLRBP48167 497 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 SERPINB4P48594 390 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 SLC18A1P54219 525 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 RBM20Q5T481 1227 aaKnown RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 KIAA0930Q6ICG6 404 aaPredicted RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 RTL10Q7L3V2 364 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 CEP97Q8IW35 865 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 NAT14Q8WUY8 206 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 ACSS2Q9NR19 701 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 DUS2Q9NX74 493 aaKnown RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 CPSF2Q9P2I0 782 aaKnown RBP12.37□□□□□ -0.43
TP53-219ENST00000610538 GGA2Q9UJY4 613 aa12.37□□□□□ -0.43
TP53-219ENST00000610538 CCDC162PA2VCL2 907 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 SRCP12931 536 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 CRHR1P34998 444 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 CDKN1CP49918 316 aaPredicted RBP12.36□□□□□ -0.43
TP53-219ENST00000610538 NSUN2Q08J23 767 aaKnown RBP eCLIP12.36□□□□□ -0.43
TP53-219ENST00000610538 IFT88Q13099 833 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 NAB1Q13506 487 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 GEN1Q17RS7 908 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 TIFABQ6ZNK6 161 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 NPAS3Q8IXF0 933 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 MOCOSQ96EN8 888 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 GDF15Q99988 308 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 ADGRE3Q9BY15 652 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 CIPCQ9C0C6 399 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 FAM96AQ9H5X1 160 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 MANSC1Q9H8J5 431 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 PHTF1Q9UMS5 762 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 KIAA0754O94854 1291 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 GLP2RO95838 553 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 PENKP01210 267 aaPredicted RBP12.36□□□□□ -0.43
TP53-219ENST00000610538 PABPC1P11940 636 aaKnown RBP12.36□□□□□ -0.43
TP53-219ENST00000610538 ARSAP15289 507 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 PFKLP17858 780 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 DHCR24Q15392 516 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 CGB2Q6NT52 195 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 LEMD2Q8NC56 503 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 ELMO2Q96JJ3 720 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 CABS1Q96KC9 395 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 LMLNQ96KR4 655 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 RHOJQ9H4E5 214 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 MRM3Q9HC36 420 aaKnown RBP12.36□□□□□ -0.43
TP53-219ENST00000610538 EMCNQ9ULC0 261 aa12.36□□□□□ -0.43
TP53-219ENST00000610538 TIMM44O43615 452 aa12.35□□□□□ -0.43
TP53-219ENST00000610538 ALADP13716 330 aa12.35□□□□□ -0.43
TP53-219ENST00000610538 CCNFP41002 786 aa12.35□□□□□ -0.43
TP53-219ENST00000610538 BCL2L1Q07817 233 aa12.35□□□□□ -0.43
TP53-219ENST00000610538 SEMA3AQ14563 771 aa12.35□□□□□ -0.43
TP53-219ENST00000610538 POM121L1PQ3SYA9 428 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms