RNA–Protein interactions for RNA: ENST00000605881.5

TRIM49D1-203, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM49D1, Length 1,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-203ENST00000605881 LIN37Q96GY3 246 aaPredicted RBP6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 PRR11Q96HE9 360 aaPredicted RBP6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 PPP1R16AQ96I34 528 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 FEM1CQ96JP0 617 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 BTBD6Q96KE9 485 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 PRICKLE1Q96MT3 831 aaPredicted RBP6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 RHOXF2Q9BQY4 288 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 ADNPQ9H2P0 1102 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 SYNCQ9H7C4 482 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 LRRC4CQ9HCJ2 640 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 EPB41L5Q9HCM4 733 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 GEMIN8Q9NWZ8 242 aaKnown RBP6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 SPASTQ9UBP0 616 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 TMEM59LQ9UK28 342 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 PPM1HQ9ULR3 514 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 DOLKQ9UPQ8 538 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 TLR6Q9Y2C9 796 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 KNL1Q8NG31 2342 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 NUMA1Q14980 2115 aa6.87□□□□□ -1.31
TRIM49D1-203ENST00000605881 GOLGA6L10A0A0M3HER8 536 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 SIGLEC16A6NMB1 481 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 M0QYT0 321 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 KPNA3O00505 521 aaPredicted RBP6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 KRIT1O00522 736 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 FPGTO14772 594 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 SART1O43290 800 aaKnown RBP6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 PSTPIP1O43586 416 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 ERLIN1O75477 346 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 FGGP02679 453 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 PRNPP04156 253 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 ANXA6P08133 673 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 GIMD1P0DJR0 217 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 LIPCP11150 499 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 VAV1P15498 845 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 NME1P15531 152 aaKnown RBP6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 PDGFRAP16234 1089 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 JUNDP17535 347 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 ITGB6P18564 788 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 CR2P20023 1033 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 TACR2P21452 398 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 NOS2P35228 1153 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 RECQLP46063 649 aaPredicted RBP6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 PLK1P53350 603 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 CLDN2P57739 230 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 SGCGQ13326 291 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 PDCLQ13371 301 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 PTK2BQ14289 1009 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 PIGHQ14442 188 aaPredicted RBP6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 DLG2Q15700 870 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 TBR1Q16650 682 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 LONRF2Q1L5Z9 754 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 ZNF284Q2VY69 593 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 DEFB133Q30KQ1 61 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 NADSYN1Q6IA69 706 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 C8orf74Q6P047 294 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 DCUN1D2Q6PH85 259 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 CRTC1Q6UUV9 634 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 TMCO3Q6UWJ1 677 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 RAB11FIP2Q7L804 512 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 BHLHA9Q7RTU4 235 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 ABI3BPQ7Z7G0 1075 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 PHLDB2Q86SQ0 1253 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 XYLT1Q86Y38 959 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 ZDHHC17Q8IUH5 632 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 RHOT1Q8IXI2 618 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 NIPA2Q8N8Q9 360 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 FRS2Q8WU20 508 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 ALG3Q92685 438 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 KRT35Q92764 455 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 FAM149B1Q96BN6 582 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 BTN2A3PQ96KV6 586 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 TMEM74Q96NL1 305 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 GFM1Q96RP9 751 aaKnown RBP6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 CPXM1Q96SM3 734 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 CCDC3Q9BQI4 270 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 FZD3Q9NPG1 666 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 SMARCAL1Q9NZC9 954 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 SARDHQ9UL12 918 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 HECTD1Q9ULT8 2610 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 CFAP46Q8IYW2 2715 aa6.86□□□□□ -1.31
TRIM49D1-203ENST00000605881 SPTA1P02549 2419 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 LY6G6EA0A0G2JKS1 128 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 SPTY2D1-AS1A0A0U1RR47 76 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 TCAF2A6NFQ2 919 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 TULP2O00295 520 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 NVLO15381 856 aaKnown RBP6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 ATP8B1O43520 1251 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 ATP9BO43861 1147 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 ERBB2P04626 1255 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 SLC2A3P11169 496 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 KRT3P12035 628 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 CHRNA3P32297 505 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 UGT1A5P35504 534 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 RGS7P49802 495 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 METAP1P53582 386 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 RNASE9P60153 205 aaKnown RBP6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 RPS21P63220 83 aaKnown RBP6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 MTA1Q13330 715 aa6.85□□□□□ -1.31
TRIM49D1-203ENST00000605881 QPCTQ16769 361 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms