RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 KLF15Q9UIH9 416 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 PHTF1Q9UMS5 762 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 PCDHB9Q9Y5E1 797 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 PCDHGC4Q9Y5F7 938 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 ADGRG1Q9Y653 693 aa8.84□□□□□ -0.99
SSBP4-208ENST00000600628 NBEAQ8NFP9 2946 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 A6NNZ2 444 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 TMEM110-MUSTN1A8MSY1 372 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 APOL1O14791 398 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 SPOPO43791 374 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 MMP20O60882 483 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 TM7SF2O76062 418 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 ZRANB2O95218 330 aaKnown RBP eCLIP8.83□□□□□ -1
SSBP4-208ENST00000600628 MAP3K6O95382 1288 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 KRT1P04264 644 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 PDHA1P08559 390 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 C6P13671 934 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 NME1P15531 152 aaKnown RBP8.83□□□□□ -1
SSBP4-208ENST00000600628 PECAM1P16284 738 aaPredicted RBP8.83□□□□□ -1
SSBP4-208ENST00000600628 TGM2P21980 687 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 LHCGRP22888 699 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 GRK6P43250 576 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 SSR1P43307 286 aaKnown RBP8.83□□□□□ -1
SSBP4-208ENST00000600628 RABIFP47224 123 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 LIG3P49916 1009 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 MAXP61244 160 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 RPL26P61254 145 aaKnown RBP8.83□□□□□ -1
SSBP4-208ENST00000600628 WASHC5Q12768 1159 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 FOXC1Q12948 553 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 BNIP3Q12983 259 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 TFDP2Q14188 446 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 PDK1Q15118 436 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 CDKN3Q16667 212 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 TFDP3Q5H9I0 405 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 PRAMEF14Q5SWL7 426 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 NPNTQ6UXI9 565 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 Q6ZSR6 202 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 TECPR1Q7Z6L1 1165 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 RAB44Q7Z6P3 723 aaPredicted RBP8.83□□□□□ -1
SSBP4-208ENST00000600628 SLCO6A1Q86UG4 719 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 NLRP8Q86W28 1048 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 KLHDC8BQ8IXV7 354 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 CCDC13Q8IYE1 715 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 RNF10Q8N5U6 811 aaKnown RBP8.83□□□□□ -1
SSBP4-208ENST00000600628 RHBDD1Q8TEB9 315 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 UBE2Q2Q8WVN8 375 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 RNF25Q96BH1 459 aaPredicted RBP8.83□□□□□ -1
SSBP4-208ENST00000600628 KLHDC7BQ96G42 594 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 TBATAQ96M53 351 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 CNTNAP3BQ96NU0 1288 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 SEMA3CQ99985 751 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 TMEM121BQ9BXQ6 578 aaPredicted RBP8.83□□□□□ -1
SSBP4-208ENST00000600628 TDRD1Q9BXT4 1180 aaKnown RBP8.83□□□□□ -1
SSBP4-208ENST00000600628 CNTNAP3Q9BZ76 1288 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 NT5MQ9NPB1 228 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 RPL26L1Q9UNX3 145 aaKnown RBP8.83□□□□□ -1
SSBP4-208ENST00000600628 RP1P56715 2156 aa8.83□□□□□ -1
SSBP4-208ENST00000600628 ZFC3H1O60293 1989 aaKnown RBP8.82□□□□□ -1
SSBP4-208ENST00000600628 ITPR1Q14643 2758 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 LY6G6EA0A0G2JKS1 128 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 A0A0J9YYE9 177 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 CCDC66A2RUB6 948 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 NPIPB15A6NHN6 443 aaPredicted RBP8.82□□□□□ -1
SSBP4-208ENST00000600628 APOC4-APOC2K7ER74 178 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 KCNK1O00180 336 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 PSMD11O00231 422 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 DDX3YO15523 660 aaKnown RBP8.82□□□□□ -1
SSBP4-208ENST00000600628 ARHGAP6O43182 974 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 CST8O60676 142 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 HEXIM1O94992 359 aaKnown RBP8.82□□□□□ -1
SSBP4-208ENST00000600628 TRIM16O95361 564 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 TOP3BO95985 862 aaKnown RBP8.82□□□□□ -1
SSBP4-208ENST00000600628 JCHAINP01591 159 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 TRBC1P01850 177 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 APOC2P02655 101 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 CSF2P04141 144 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 CAPNS1P04632 268 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 KRT10P13645 584 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 DGKAP23743 735 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 TEAD1P28347 426 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 CD68P34810 354 aaPredicted RBP8.82□□□□□ -1
SSBP4-208ENST00000600628 NOP2P46087 812 aaKnown RBP8.82□□□□□ -1
SSBP4-208ENST00000600628 ARRB1P49407 418 aaPredicted RBP8.82□□□□□ -1
SSBP4-208ENST00000600628 GSDMDP57764 484 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 SKOR1P84550 965 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 CCZ1BP86790 482 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 CCZ1P86791 482 aaPredicted RBP8.82□□□□□ -1
SSBP4-208ENST00000600628 IL9RQ01113 521 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 DSC2Q02487 901 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 DPTQ07507 201 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 EIF2B5Q13144 721 aaKnown RBP8.82□□□□□ -1
SSBP4-208ENST00000600628 KLF1Q13351 362 aaPredicted RBP8.82□□□□□ -1
SSBP4-208ENST00000600628 XRCC4Q13426 336 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 MTM1Q13496 603 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 CNGA3Q16281 694 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 TEX44Q53QW1 395 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 ESRP1Q6NXG1 681 aaKnown RBP8.82□□□□□ -1
SSBP4-208ENST00000600628 KDM7AQ6ZMT4 941 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 DAAM2Q86T65 1068 aa8.82□□□□□ -1
SSBP4-208ENST00000600628 PELI3Q8N2H9 469 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms