RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	NIPAL4	Q0D2K0	466 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	FOXC1	Q12948	553 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	PDE1C	Q14123	709 aa	Predicted RBP	13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	PDK1	Q15118	436 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	TFDP3	Q5H9I0	405 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	TPRG1L	Q5T0D9	272 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	ARMC12	Q5T9G4	340 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	NPNT	Q6UXI9	565 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	KDM7A	Q6ZMT4	941 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	EID2	Q8N6I1	236 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	CNTD1	Q8N815	330 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	ACRBP	Q8NEB7	543 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	EXD1	Q8NHP7	514 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	PIH1D2	Q8WWB5	315 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	ADAMTS14	Q8WXS8	1223 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	DNAJC28	Q9NX36	388 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	TOR4A	Q9NXH8	423 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	B4GALT6	Q9UBX8	382 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	FTSJ1	Q9UET6	329 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	PCDHA3	Q9Y5H8	950 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	RAI2	Q9Y5P3	530 aa		13.53	□□□□□ -0.24
ARHGEF1-222	ENST00000600517	hCG_1818297	A0A087WSY0	165 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	FAM221B	A6H8Z2	402 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517		A8MX80	341 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PPP1R12A	O14974	1030 aa	Predicted RBP	13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CST8	O60676	142 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	SDC3	O75056	442 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PIAS2	O75928	621 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	NEBL	O76041	1014 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	RECQL5	O94762	991 aa	Predicted RBP	13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	DKK1	O94907	266 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TOP3B	O95985	862 aa	Known RBP	13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	HLA-DQB2	P05538	268 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PDHA1	P08559	390 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ELFN1	P0C7U0	828 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	NME1	P15531	152 aa	Known RBP	13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	NFKBIA	P25963	317 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	MARCKSL1	P49006	195 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PEX5	P50542	639 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	THOP1	P52888	689 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	DYNLT1	P63172	113 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	DSC2	Q02487	901 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PTK2B	Q14289	1009 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	INPP5A	Q14642	412 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	IRF4	Q15306	451 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ZNF542P	Q5EBM4	170 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	BZW1	Q7L1Q6	419 aa	Known RBP	13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PARG	Q86W56	976 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PNPLA1	Q8N8W4	532 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	KIAA1524	Q8TCG1	905 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	KRT35	Q92764	455 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	RBM41	Q96IZ5	413 aa	Known RBP	13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	UCKL1	Q9NWZ5	548 aa		13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	SAE1	Q9UBE0	346 aa	Predicted RBP	13.52	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	HYAL3	O43820	417 aa	Predicted RBP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	HEXIM1	O94992	359 aa	Known RBP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	LDOC1	O95751	146 aa	Predicted RBP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	GIMD1	P0DJR0	217 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CYP2A6	P11509	494 aa	Predicted RBP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	GM2A	P17900	193 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	VIPR1	P32241	457 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CTNNA1	P35221	906 aa	Known RBP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	NAP1L1	P55209	391 aa	Known RBP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	RPL26	P61254	145 aa	Known RBP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ADCY2	Q08462	1091 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	AP1B1	Q10567	949 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	KIF5A	Q12840	1032 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ZBTB17	Q13105	803 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	EIF2B5	Q13144	721 aa	Known RBP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ZNF211	Q13398	564 aa	Predicted RBP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	MTM1	Q13496	603 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CNGA3	Q16281	694 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	KIAA1328	Q86T90	577 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	NDUFAF2	Q8N183	169 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TXLNB	Q8N3L3	684 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CHCHD4	Q8N4Q1	142 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	LRRC57	Q8N9N7	239 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CNDP2	Q96KP4	475 aa	Known RBP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	COQ10A	Q96MF6	247 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	APOO	Q9BUR5	198 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	SCNM1	Q9BWG6	230 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TDRD1	Q9BXT4	1180 aa	Known RBP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CAAP1	Q9H8G2	361 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	KCTD5	Q9NXV2	234 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	KLF15	Q9UIH9	416 aa		13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	RPL26L1	Q9UNX3	145 aa	Known RBP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TPR	P12270	2363 aa	Known RBP	13.51	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TMEM131	Q92545	1883 aa		13.5	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CCDC66	A2RUB6	948 aa		13.5	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	NEMP2	A6NFY4	417 aa		13.5	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.5	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	GOLGA6L6	A8MZA4	724 aa		13.5	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PSMD11	O00231	422 aa		13.5	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TRIM38	O00635	465 aa		13.5	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ENC1	O14682	589 aa		13.5	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	SCAMP1	O15126	338 aa		13.5	□□□□□ -0.25

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