RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 RAPGEF5Q92565 580 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 FATE1Q969F0 183 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 CENPTQ96BT3 561 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 ECHDC3Q96DC8 303 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 KLF6Q99612 283 aaPredicted RBP14.22□□□□□ -0.13
LIG1-218ENST00000599322 IL12RB2Q99665 862 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 SEMA3CQ99985 751 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 BRD8Q9H0E9 1235 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 NOD2Q9HC29 1040 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 DNPEPQ9ULA0 475 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 MSRB2Q9Y3D2 182 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 PCDHGC4Q9Y5F7 938 aa14.22□□□□□ -0.13
LIG1-218ENST00000599322 CABIN1Q9Y6J0 2220 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 A0A0A6YYK5 440 aaPredicted RBP14.21□□□□□ -0.13
LIG1-218ENST00000599322 TMEM8BA6NDV4 472 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 CACNB4O00305 520 aaPredicted RBP14.21□□□□□ -0.13
LIG1-218ENST00000599322 MUSKO15146 869 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 PSTPIP1O43586 416 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 RFPL3O75679 317 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 PIAS2O75928 621 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 NME1P15531 152 aaKnown RBP14.21□□□□□ -0.13
LIG1-218ENST00000599322 COMTP21964 271 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 HNF1BP35680 557 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 TNNT3P45378 269 aaPredicted RBP14.21□□□□□ -0.13
LIG1-218ENST00000599322 HADHBP55084 474 aaKnown RBP14.21□□□□□ -0.13
LIG1-218ENST00000599322 PFN3P60673 137 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 PPARDQ03181 441 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 ZNF211Q13398 564 aaPredicted RBP14.21□□□□□ -0.13
LIG1-218ENST00000599322 MTM1Q13496 603 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 DPPA4Q7L190 304 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 KIAA1328Q86T90 577 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 SLCO6A1Q86UG4 719 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 TEX26Q8N6G2 289 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 RNF25Q96BH1 459 aaPredicted RBP14.21□□□□□ -0.13
LIG1-218ENST00000599322 FAF2Q96CS3 445 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 HDAC11Q96DB2 347 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 FERMT1Q9BQL6 677 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 CSNK1G3Q9Y6M4 447 aa14.21□□□□□ -0.13
LIG1-218ENST00000599322 ADAMTS20P59510 1910 aa14.21□□□□□ -0.14
LIG1-218ENST00000599322 SRRM3A6NNA2 597 aaPredicted RBP14.2□□□□□ -0.14
LIG1-218ENST00000599322 TRAFD1O14545 582 aaPredicted RBP14.2□□□□□ -0.14
LIG1-218ENST00000599322 SCAMP1O15126 338 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 FFAR2O15552 330 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 SPINT1O43278 529 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 HTRA2O43464 458 aaPredicted RBP14.2□□□□□ -0.14
LIG1-218ENST00000599322 RECQL5O94762 991 aaPredicted RBP14.2□□□□□ -0.14
LIG1-218ENST00000599322 ZRANB2O95218 330 aaKnown RBP eCLIP14.2□□□□□ -0.14
LIG1-218ENST00000599322 NDUFA10O95299 355 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 MAP3K6O95382 1288 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 LCA5LO95447 670 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 PEX11BO96011 259 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 PRKCGP05129 697 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 PCCBP05166 539 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 VIPR1P32241 457 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 IGFALSP35858 605 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 NR2C2P49116 596 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 RPIAP49247 311 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 E2F1Q01094 437 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 GBE1Q04446 702 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 AP1B1Q10567 949 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 FZD2Q14332 565 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 INPP5AQ14642 412 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 AGERQ15109 404 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 IRF4Q15306 451 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 ZNF542PQ5EBM4 170 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 CCDC181Q5TID7 509 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 CCDC70Q6NSX1 233 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 LIPIQ6XZB0 460 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 MACC1Q6ZN28 852 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 DAAM2Q86T65 1068 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 CPNE8Q86YQ8 564 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 CCDC50Q8IVM0 306 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 RCOR2Q8IZ40 523 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 SLC22A18ASQ8N1D0 253 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.2□□□□□ -0.14
LIG1-218ENST00000599322 TP53I13Q8NBR0 393 aaPredicted RBP14.2□□□□□ -0.14
LIG1-218ENST00000599322 OR4C6Q8NH72 309 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 TPCN2Q8NHX9 752 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 LMX1AQ8TE12 382 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 MAML1Q92585 1016 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 RBM41Q96IZ5 413 aaKnown RBP14.2□□□□□ -0.14
LIG1-218ENST00000599322 USP29Q9HBJ7 922 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 NLGN3Q9NZ94 848 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 IMPACTQ9P2X3 320 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 APOBEC3BQ9UH17 382 aaKnown RBP14.2□□□□□ -0.14
LIG1-218ENST00000599322 COQ6Q9Y2Z9 468 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 RAI2Q9Y5P3 530 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 ALG6Q9Y672 507 aa14.2□□□□□ -0.14
LIG1-218ENST00000599322 PKD1L2Q7Z442 2459 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 FREM2Q5SZK8 3169 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 TTC24A2A3L6 582 aaPredicted RBP14.19□□□□□ -0.14
LIG1-218ENST00000599322 A8MX80 341 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 AQP9O43315 295 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 RASGRP1O95267 797 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 PGLSO95336 258 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 TNFP01375 233 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 JCHAINP01591 159 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 ANXA6P08133 673 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 ALPIP09923 528 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 JUPP14923 745 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms