RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 CCNI2Q6ZMN8 369 aaPredicted RBP20.23■□□□□ 0.83
IRF3-221ENST00000598808 HORMAD1Q86X24 394 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 SPATA22Q8NHS9 363 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 CCDC110Q8TBZ0 833 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 HCAR2Q8TDS4 363 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 IFT43Q96FT9 208 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 FEM1CQ96JP0 617 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 KRT12Q99456 494 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 TDRD1Q9BXT4 1180 aaKnown RBP20.23■□□□□ 0.83
IRF3-221ENST00000598808 AASDHPPTQ9NRN7 309 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 TRHDEQ9UKU6 1024 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 ZNF148Q9UQR1 794 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 PCDHGA5Q9Y5G8 931 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 A0A1W2PQ67 120 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 SLC31A1O15431 190 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 AP1G1O43747 822 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 LIASO43766 372 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 ZNF189O75820 626 aaPredicted RBP20.22■□□□□ 0.83
IRF3-221ENST00000598808 CD27P26842 260 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 SUOXP51687 545 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 RPS21P63220 83 aaKnown RBP20.22■□□□□ 0.83
IRF3-221ENST00000598808 DHX34Q14147 1143 aaKnown RBP20.22■□□□□ 0.83
IRF3-221ENST00000598808 BEND6Q5SZJ8 279 aaPredicted RBP20.22■□□□□ 0.83
IRF3-221ENST00000598808 ARHGEF18Q6ZSZ5 1173 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 TRIM69Q86WT6 500 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 NDUFAF2Q8N183 169 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 ECHDC3Q96DC8 303 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 IMP4Q96G21 291 aaKnown RBP20.22■□□□□ 0.83
IRF3-221ENST00000598808 SERAC1Q96JX3 654 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 FRMD8P1Q9BZ68 369 aaPredicted RBP20.22■□□□□ 0.83
IRF3-221ENST00000598808 PCDH9Q9HC56 1237 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 HOMER3Q9NSC5 361 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 TMEM74BQ9NUR3 256 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 SUSD2Q9UGT4 822 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 PILRBQ9UKJ0 227 aa20.22■□□□□ 0.83
IRF3-221ENST00000598808 PTPRZ1P23471 2315 aaPredicted RBP20.22■□□□□ 0.83
IRF3-221ENST00000598808 EP300Q09472 2414 aaPredicted RBP20.22■□□□□ 0.83
IRF3-221ENST00000598808 TNRC6BQ9UPQ9 1833 aaKnown RBP20.21■□□□□ 0.83
IRF3-221ENST00000598808 HTRA2O43464 458 aaPredicted RBP20.21■□□□□ 0.83
IRF3-221ENST00000598808 MMP20O60882 483 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 MT-CYBP00156 380 aaPredicted RBP20.21■□□□□ 0.83
IRF3-221ENST00000598808 IFNB1P01574 187 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 MMP2P08253 660 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 CD68P34810 354 aaPredicted RBP20.21■□□□□ 0.83
IRF3-221ENST00000598808 SGCGQ13326 291 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 GALNT3Q14435 633 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 ANKRD20A2Q5SQ80 823 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 ANKRD20A1Q5TYW2 823 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 ANKRD20A3Q5VUR7 823 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 DENND2CQ68D51 928 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 NEK5Q6P3R8 708 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 USP45Q70EL2 814 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 HDXQ7Z353 690 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 TAB3Q8N5C8 712 aaPredicted RBP20.21■□□□□ 0.83
IRF3-221ENST00000598808 SLC35B2Q8TB61 432 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 RMDN1Q96DB5 314 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 SLC6A18Q96N87 628 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 SPATA13Q96N96 652 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 FZD3Q9NPG1 666 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 GDF3Q9NR23 364 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 VPS45Q9NRW7 570 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 ZNF446Q9NWS9 450 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 PHTF1Q9UMS5 762 aa20.21■□□□□ 0.83
IRF3-221ENST00000598808 ZFR2Q9UPR6 939 aaKnown RBP20.21■□□□□ 0.83
IRF3-221ENST00000598808 DMXL1Q9Y485 3027 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 CFAP69A5D8W1 941 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 FAM187AA6NFU0 413 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 IGLON5A6NGN9 336 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 GOLGA8CPA6NN73 597 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 PATE3B3GLJ2 98 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 AREL1O15033 823 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 BCAT2O15382 392 aaPredicted RBP20.2■□□□□ 0.82
IRF3-221ENST00000598808 SPINT1O43278 529 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 PDHA1P08559 390 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 ELFN1P0C7U0 828 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 CYP2A6P11509 494 aaPredicted RBP20.2■□□□□ 0.82
IRF3-221ENST00000598808 MMP12P39900 470 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 CUL1Q13616 776 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 PRPSAP1Q14558 356 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 CYP1B1Q16678 543 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 TRIM61Q5EBN2 209 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 TCEAL6Q6IPX3 200 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 GSTA5Q7RTV2 222 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 C12orf50Q8NA57 414 aaPredicted RBP20.2■□□□□ 0.82
IRF3-221ENST00000598808 IPMKQ8NFU5 416 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 TCEAL3Q969E4 200 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 GBA3Q9H227 469 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 B4GALT6Q9UBX8 382 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 TPX2Q9ULW0 747 aaKnown RBP20.2■□□□□ 0.82
IRF3-221ENST00000598808 COQ6Q9Y2Z9 468 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 GON4LQ3T8J9 2241 aa20.2■□□□□ 0.82
IRF3-221ENST00000598808 A0A1W2PPC4 97 aa20.19■□□□□ 0.82
IRF3-221ENST00000598808 KHNYNO15037 678 aaKnown RBP20.19■□□□□ 0.82
IRF3-221ENST00000598808 LZTS3O60299 673 aaPredicted RBP20.19■□□□□ 0.82
IRF3-221ENST00000598808 OPHN1O60890 802 aa20.19■□□□□ 0.82
IRF3-221ENST00000598808 PHF2O75151 1096 aa20.19■□□□□ 0.82
IRF3-221ENST00000598808 ALPIP09923 528 aa20.19■□□□□ 0.82
IRF3-221ENST00000598808 PSMB4P28070 264 aa20.19■□□□□ 0.82
IRF3-221ENST00000598808 ACTN2P35609 894 aa20.19■□□□□ 0.82
IRF3-221ENST00000598808 GDF10P55107 478 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms