RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 NSUN2Q08J23 767 aaKnown RBP eCLIP13.84□□□□□ -0.19
SCAF1-203ENST00000598359 RALGDSQ12967 914 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 INPP5AQ14642 412 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 RFTN1Q14699 578 aaPredicted RBP13.84□□□□□ -0.19
SCAF1-203ENST00000598359 GRM3Q14832 879 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 PTPRRQ15256 657 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 PRRT3Q5FWE3 981 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 KCTD16Q68DU8 428 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 SPECC1LQ69YQ0 1117 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 PHACTR4Q8IZ21 702 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 ATPAF2Q8N5M1 289 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 PDCD7Q8N8D1 485 aaKnown RBP13.84□□□□□ -0.19
SCAF1-203ENST00000598359 PLA2G15Q8NCC3 412 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 PDCD6IPQ8WUM4 868 aaKnown RBP13.84□□□□□ -0.19
SCAF1-203ENST00000598359 TSACCQ96A04 125 aaPredicted RBP13.84□□□□□ -0.19
SCAF1-203ENST00000598359 ECHDC3Q96DC8 303 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 NOD2Q9HC29 1040 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 APOBEC3BQ9UH17 382 aaKnown RBP13.84□□□□□ -0.19
SCAF1-203ENST00000598359 LRRK1Q38SD2 2015 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 NAV2Q8IVL1 2488 aa13.84□□□□□ -0.19
SCAF1-203ENST00000598359 NEMP2A6NFY4 417 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 CASC3O15234 703 aaKnown RBP13.83□□□□□ -0.2
SCAF1-203ENST00000598359 MFSD11O43934 449 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 PROSCO94903 275 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 GM2AP17900 193 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 ARSEP51690 589 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 ADKP55263 362 aaKnown RBP13.83□□□□□ -0.2
SCAF1-203ENST00000598359 YPEL5P62699 121 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 ILKQ13418 452 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 DPYSL3Q14195 570 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 SLC18A3Q16572 532 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 CDKN3Q16667 212 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 ASTE1Q2TB18 679 aaPredicted RBP13.83□□□□□ -0.2
SCAF1-203ENST00000598359 COL28A1Q2UY09 1125 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 FAXCQ5TGI0 409 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 MACC1Q6ZN28 852 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 RD3Q7Z3Z2 195 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 HID1Q8IV36 788 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 PELI3Q8N2H9 469 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCAF1-203ENST00000598359 CCDC112Q8NEF3 446 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 OR8K1Q8NGG5 319 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 ZNF599Q96NL3 588 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 DNAJC7Q99615 494 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 CHP1Q99653 195 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 LRRC61Q9BV99 259 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 CLPBQ9H078 707 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 SCUBE2Q9NQ36 999 aa13.83□□□□□ -0.2
SCAF1-203ENST00000598359 APC2O95996 2303 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 ANKRD36A6QL64 1941 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 A0A0U1RQS6 177 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 CPED1A4D0V7 1026 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 OPA1O60313 960 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 RECQL5O94762 991 aaPredicted RBP13.82□□□□□ -0.2
SCAF1-203ENST00000598359 MT-CO3P00414 261 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 ELFN1P0C7U0 828 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 CDK4P11802 303 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 TSHRP16473 764 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 CR2P20023 1033 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 RENBPP51606 427 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 AP1S1P61966 158 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 TRAF2Q12933 501 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 PTK2BQ14289 1009 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 HADHQ16836 314 aaKnown RBP13.82□□□□□ -0.2
SCAF1-203ENST00000598359 ALG11Q2TAA5 492 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 FAM182AQ5T1J6 154 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 NCBP2-AS2Q69YL0 99 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 GUSBP11Q6P575 273 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 CRTC1Q6UUV9 634 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 ENPP7Q6UWV6 458 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 LIPIQ6XZB0 460 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 FAM181AQ8N9Y4 354 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 KCTD6Q8NC69 237 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 PCDH19Q8TAB3 1148 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 IFI44Q8TCB0 444 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 CTNNBL1Q8WYA6 563 aaPredicted RBP13.82□□□□□ -0.2
SCAF1-203ENST00000598359 FUBP1Q96AE4 644 aaKnown RBP13.82□□□□□ -0.2
SCAF1-203ENST00000598359 BBC3Q96PG8 261 aaPredicted RBP13.82□□□□□ -0.2
SCAF1-203ENST00000598359 SMIM14Q96QK8 99 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 NUDCD1Q96RS6 583 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 APOOQ9BUR5 198 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 SLC13A1Q9BZW2 595 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 DEF6Q9H4E7 631 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 NT5MQ9NPB1 228 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 SPASTQ9UBP0 616 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 B4GALT6Q9UBX8 382 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 CLCA2Q9UQC9 943 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 CSNK1G3Q9Y6M4 447 aa13.82□□□□□ -0.2
SCAF1-203ENST00000598359 URB1O60287 2271 aaKnown RBP13.81□□□□□ -0.2
SCAF1-203ENST00000598359 EIF4E1BA6NMX2 242 aaKnown RBP13.81□□□□□ -0.2
SCAF1-203ENST00000598359 NRDCO43847 1150 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 AKR1B10O60218 316 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 CPP00450 1065 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 H2AFZP0C0S5 128 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 SERPINB6P35237 376 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 MMP13P45452 471 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 PPARDQ03181 441 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 MESDQ14696 234 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 ACOX1Q15067 660 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 ANKRD20A8PQ5CZ79 823 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms