RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 OPA1O60313 960 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 TPM1P09493 284 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 TSHRP16473 764 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 GJC1P36383 396 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 MMP13P45452 471 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 BLKP51451 505 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 MAXP61244 160 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 RALGPS1Q5JS13 557 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 HID1Q8IV36 788 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 DCBLD1Q8N8Z6 715 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 PLA2G15Q8NCC3 412 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 SLC35G2Q8TBE7 412 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 PDCD6IPQ8WUM4 868 aaKnown RBP15.14■□□□□ 0.01
LIG1-215ENST00000597901 CCDC42Q96M95 316 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 CLPBQ9H078 707 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 NHEJ1Q9H9Q4 299 aaPredicted RBP15.14■□□□□ 0.01
LIG1-215ENST00000597901 ABHD10Q9NUJ1 306 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 EVA1BQ9NVM1 165 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 B4GALT6Q9UBX8 382 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 LCMT1Q9UIC8 334 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 RAXQ9Y2V3 346 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 OR1A2Q9Y585 309 aa15.14■□□□□ 0.01
LIG1-215ENST00000597901 SPEGQ15772 3267 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 CPED1A4D0V7 1026 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 LMO7DNF2Z398 122 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 SOCS5O75159 536 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 PCCBP05166 539 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 GP1BAP07359 652 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 ANXA6P08133 673 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 KRT7P08729 469 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 ELFN1P0C7U0 828 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 GM2AP17900 193 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 HTR1BP28222 390 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 HK3P52790 923 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 GALNT2Q10471 571 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 MTM1Q13496 603 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 MESDQ14696 234 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 NFATC4Q14934 902 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 RTP5Q14D33 572 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 ACOX1Q15067 660 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 CDKN3Q16667 212 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 ALG11Q2TAA5 492 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 CDCP2Q5VXM1 449 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 NCBP2-AS2Q69YL0 99 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 NYAP1Q6ZVC0 841 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 RD3Q7Z3Z2 195 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 CBARPQ8N350 705 aaPredicted RBP15.13■□□□□ 0.01
LIG1-215ENST00000597901 TSGA13Q96PP4 275 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 LRRC61Q9BV99 259 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 NRSN2Q9GZP1 204 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 ABCG4Q9H172 646 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 NT5MQ9NPB1 228 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 NCKIPSDQ9NZQ3 722 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 PHTF1Q9UMS5 762 aa15.13■□□□□ 0.01
LIG1-215ENST00000597901 ARID1BQ8NFD5 2236 aaPredicted RBP15.13■□□□□ 0.01
LIG1-215ENST00000597901 EME2A4GXA9 379 aaPredicted RBP15.12■□□□□ 0.01
LIG1-215ENST00000597901 MATN3O15232 486 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 MFAP3LO75121 409 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 RASGRP1O95267 797 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 HOXC4P09017 264 aaPredicted RBP15.12■□□□□ 0.01
LIG1-215ENST00000597901 CTSEP14091 401 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 KDELR1P24390 212 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 CCNCP24863 283 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 MAN1A1P33908 653 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 TRIM23P36406 574 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 GARSP41250 739 aaKnown RBP15.12■□□□□ 0.01
LIG1-215ENST00000597901 SRP54P61011 504 aaKnown RBP15.12■□□□□ 0.01
LIG1-215ENST00000597901 ITKQ08881 620 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 SLC10A2Q12908 348 aaPredicted RBP15.12■□□□□ 0.01
LIG1-215ENST00000597901 TRAF2Q12933 501 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 IFI16Q16666 785 aaKnown RBP15.12■□□□□ 0.01
LIG1-215ENST00000597901 PNCKQ6P2M8 343 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 FSTL5Q8N475 847 aaPredicted RBP15.12■□□□□ 0.01
LIG1-215ENST00000597901 PQLC3Q8N755 202 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 ATL2Q8NHH9 583 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 IFI44Q8TCB0 444 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 RAPGEF5Q92565 580 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 MAML1Q92585 1016 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 FUBP1Q96AE4 644 aaKnown RBP15.12■□□□□ 0.01
LIG1-215ENST00000597901 FAF2Q96CS3 445 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 SCRN2Q96FV2 425 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 COQ10AQ96MF6 247 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 WDR92Q96MX6 357 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 SEMA3CQ99985 751 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 ZNF670Q9BS34 389 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 BOCQ9BWV1 1114 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 SPTLC3Q9NUV7 552 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 AK5Q9Y6K8 562 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 IGF2RP11717 2491 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 PTPRBP23467 1997 aa15.12■□□□□ 0.01
LIG1-215ENST00000597901 TMEM202A6NGA9 273 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 MFSD11O43934 449 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 PGLSO95336 258 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 MAP3K6O95382 1288 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 CPP00450 1065 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 TNFP01375 233 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 CELA2BP08218 269 aaPredicted RBP15.11■□□□□ 0.01
LIG1-215ENST00000597901 CES1P23141 567 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 VIPR1P32241 457 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 ARHGAP25P42331 645 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms