RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 DESP17661 470 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 TNFAIP3P21580 790 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 SERPINA4P29622 427 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 HTR7P34969 479 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 RHDQ02161 417 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 VAC14Q08AM6 782 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 CLN3Q13286 438 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 MTM1Q13496 603 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 LY6DQ14210 128 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 GRM3Q14832 879 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 PPP6R3Q5H9R7 873 aaPredicted RBP10.59□□□□□ -0.71
LSM4-205ENST00000597776 AFMIDQ63HM1 303 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 LVRNQ6Q4G3 990 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 RFX8Q6ZV50 586 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 CYP4V2Q6ZWL3 525 aaPredicted RBP10.59□□□□□ -0.71
LSM4-205ENST00000597776 CLEC14AQ86T13 490 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 GKN2Q86XP6 184 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 TP53INP2Q8IXH6 220 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 PELI3Q8N2H9 469 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 ARL14Q8N4G2 192 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 AOPEPQ8N6M6 819 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 PAF1Q8N7H5 531 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 Q8N9G6 341 aaPredicted RBP10.59□□□□□ -0.71
LSM4-205ENST00000597776 WDR48Q8TAF3 677 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 FUBP1Q96AE4 644 aaKnown RBP10.59□□□□□ -0.71
LSM4-205ENST00000597776 TUBGCP5Q96RT8 1024 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 RBM15Q96T37 977 aaKnown RBP eCLIP10.59□□□□□ -0.71
LSM4-205ENST00000597776 CINPQ9BW66 212 aaPredicted RBP10.59□□□□□ -0.71
LSM4-205ENST00000597776 SEMA4CQ9C0C4 833 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 ATP13A3Q9H7F0 1226 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 SP110Q9HB58 689 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 EPB41L5Q9HCM4 733 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 FGF22Q9HCT0 170 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 MRPL40Q9NQ50 206 aaKnown RBP10.59□□□□□ -0.71
LSM4-205ENST00000597776 PARVAQ9NVD7 372 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 WDR70Q9NW82 654 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 SSUH2Q9Y2M2 353 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 SETXQ7Z333 2677 aaKnown RBP10.59□□□□□ -0.71
LSM4-205ENST00000597776 TENM4Q6N022 2769 aa10.59□□□□□ -0.71
LSM4-205ENST00000597776 ANKRD36A6QL64 1941 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 A0A1W2PQM1 296 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 TTC24A2A3L6 582 aaPredicted RBP10.58□□□□□ -0.72
LSM4-205ENST00000597776 PLD2O14939 933 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 TEX33O43247 280 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 TNFP01375 233 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 ITGA2BP08514 1039 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 ELFN1P0C7U0 828 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 KRT10P13645 584 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 HGFP14210 728 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 GM2AP17900 193 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 ERCC2P18074 760 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 MIPP30301 263 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 CSNK1DP48730 415 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 BCL2L1Q07817 233 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 AGERQ15109 404 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 ZSCAN23Q3MJ62 389 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 ERMARDQ5T6L9 678 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 KIAA1614Q5VZ46 1190 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 E4F1Q66K89 784 aaPredicted RBP10.58□□□□□ -0.72
LSM4-205ENST00000597776 PLEKHA7Q6IQ23 1121 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 LIPIQ6XZB0 460 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 RAB11FIP2Q7L804 512 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 ZNF605Q86T29 641 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 OR56A4Q8NGH8 313 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 TTC9Q92623 222 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 ECHDC3Q96DC8 303 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 LIN37Q96GY3 246 aaPredicted RBP10.58□□□□□ -0.72
LSM4-205ENST00000597776 GFM1Q96RP9 751 aaKnown RBP10.58□□□□□ -0.72
LSM4-205ENST00000597776 LGR4Q9BXB1 951 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 DONSONQ9NYP3 566 aa10.58□□□□□ -0.72
LSM4-205ENST00000597776 ATXN7L1Q9ULK2 861 aaPredicted RBP10.58□□□□□ -0.72
LSM4-205ENST00000597776 TMEM191CA6NGB0 347 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 LRRC53A6NM62 1247 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 B4DGG1 531 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 K7ENP7 123 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 CACNB4O00305 520 aaPredicted RBP10.57□□□□□ -0.72
LSM4-205ENST00000597776 PRPSAP2O60256 369 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 CCDC172P0C7W6 258 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 SLC5A2P31639 672 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 UGT1A5P35504 534 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 SCNN1BP51168 640 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 INHBCP55103 352 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 KIAA1024LP59773 190 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 ASIC2Q16515 512 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 INO80CQ6PI98 192 aaPredicted RBP10.57□□□□□ -0.72
LSM4-205ENST00000597776 DPPA4Q7L190 304 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 ZNF571Q7Z3V5 609 aaPredicted RBP10.57□□□□□ -0.72
LSM4-205ENST00000597776 TAF8Q7Z7C8 310 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 JAMLQ86YT9 394 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 CCNJLQ8IV13 435 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 FBXO39Q8N4B4 442 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 FAM46DQ8NEK8 389 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 GPR156Q8NFN8 814 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 ATL2Q8NHH9 583 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 CCL4L1Q8NHW4 92 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 SNRNP27Q8WVK2 155 aaKnown RBP10.57□□□□□ -0.72
LSM4-205ENST00000597776 CCDC97Q96F63 343 aaPredicted RBP10.57□□□□□ -0.72
LSM4-205ENST00000597776 TMEM168Q9H0V1 697 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 LRRN3Q9H3W5 708 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 SUDS3Q9H7L9 328 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms