RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PDHA1P08559 390 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 CD38P28907 300 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 CD68P34810 354 aaPredicted RBP19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 CSNK1EP49674 416 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 ATXN3P54252 364 aaPredicted RBP19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 STAT4Q14765 748 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 ITPRIPL1Q6GPH6 555 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 USP45Q70EL2 814 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 LPCAT1Q8NF37 534 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 SLC35B2Q8TB61 432 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 PIH1D2Q8WWB5 315 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 ATG4AQ8WYN0 398 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 SKA1Q96BD8 255 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 EDEM2Q9BV94 578 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 C1QTNF7Q9BXJ2 289 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 C1QTNF2Q9BXJ5 285 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 FRMD8P1Q9BZ68 369 aaPredicted RBP19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 FZD3Q9NPG1 666 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 FSCN3Q9NQT6 498 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 B4GALT6Q9UBX8 382 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 RSPH14Q9UHP6 348 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 DNPEPQ9ULA0 475 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 A0A1B0GVT2 93 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 A8MX80 341 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 F5H423 210 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 LZTS3O60299 673 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 FZD6O60353 706 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 FGGP02679 453 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 ATP1A1P05023 1023 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 ELFN1P0C7U0 828 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 C6P13671 934 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 CTPS1P17812 591 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 ENGP17813 658 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 VIPR1P32241 457 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 LIG3P49916 1009 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 C21orf59P57076 290 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 RALGDSQ12967 914 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 FGL2Q14314 439 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 SLC14A2Q15849 920 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 PCSK7Q16549 785 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 LAYNQ6UX15 382 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 SPATA22Q8NHS9 363 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 IFT43Q96FT9 208 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 PBKQ96KB5 322 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 GTPBP2Q9BX10 602 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 COQ6Q9Y2Z9 468 aa19.75■□□□□ 0.75
SHKBP1-214ENST00000597396 TDRD6O60522 2096 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 CFAP69A5D8W1 941 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 ARHGAP33O14559 1287 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 WNT9AO14904 365 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 PMPCBO75439 489 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 MT-CYBP00156 380 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 TNNT3P45378 269 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 RPL26P61254 145 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 GNG11P61952 73 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 GRIK2Q13002 908 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 ARHGEF7Q14155 803 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 LONRF2Q1L5Z9 754 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 ANKRD20A2Q5SQ80 823 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 ANKRD20A1Q5TYW2 823 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 ANKRD20A3Q5VUR7 823 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 LIPIQ6XZB0 460 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 C1orf54Q8WWF1 131 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 ASB12Q8WXK4 309 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 SCRN2Q96FV2 425 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 SPATA13Q96N96 652 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 FCRL5Q96RD9 977 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 ADGRE3Q9BY15 652 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 ZDHHC5Q9C0B5 715 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 GBA3Q9H227 469 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 USP29Q9HBJ7 922 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 UBP1Q9NZI7 540 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 FAM153AQ9UHL3 310 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 RPL26L1Q9UNX3 145 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 CA5BQ9Y2D0 317 aa19.74■□□□□ 0.75
SHKBP1-214ENST00000597396 NCOR2Q9Y618 2525 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 A0A0J9YYE9 177 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 VILLO15195 856 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 LIASO43766 372 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 OPHN1O60890 802 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 PRLP01236 227 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 TRBC1P01850 177 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 ALPIP09923 528 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 SNX1Q13596 522 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 CCDC70Q6NSX1 233 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 KDELC2Q7Z4H8 507 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 FAM71DQ8N9W8 422 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 MFSD2AQ8NA29 543 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 TMEM145Q8NBT3 493 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 DENND6BQ8NEG7 585 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 CCDC110Q8TBZ0 833 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 MCCC1Q96RQ3 725 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 TMEM121Q9BTD3 319 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 RXFP3Q9NSD7 469 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 ANKRD6Q9Y2G4 727 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 PPIL1Q9Y3C6 166 aa19.73■□□□□ 0.75
SHKBP1-214ENST00000597396 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 A0A1W2PR77 199 aa19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 NPIPB15A6NHN6 443 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-214ENST00000597396 FPGTO14772 594 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms