RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 SEMA3AQ14563 771 aa22.79■■□□□ 1.24
SRRM1-222ENST00000596378 CPSF7Q8N684 471 aaKnown RBP22.79■■□□□ 1.24
SRRM1-222ENST00000596378 SPATA17Q96L03 361 aa22.79■■□□□ 1.24
SRRM1-222ENST00000596378 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.79■■□□□ 1.248e-11■■■■■ 34.9
SRRM1-222ENST00000596378 SLC38A8A6NNN8 435 aa22.79■■□□□ 1.24
SRRM1-222ENST00000596378 IPO13O94829 963 aaKnown RBP22.79■■□□□ 1.24
SRRM1-222ENST00000596378 GOT2P00505 430 aaKnown RBP22.79■■□□□ 1.24
SRRM1-222ENST00000596378 PRSS56P0CW18 603 aa22.79■■□□□ 1.24
SRRM1-222ENST00000596378 RPL17P18621 184 aaKnown RBP22.79■■□□□ 1.24
SRRM1-222ENST00000596378 TSPAN8P19075 237 aa22.79■■□□□ 1.24
SRRM1-222ENST00000596378 TNK2Q07912 1038 aa22.79■■□□□ 1.24
SRRM1-222ENST00000596378 CYLC2Q14093 348 aaPredicted RBP22.79■■□□□ 1.24
SRRM1-222ENST00000596378 LRRC36Q1X8D7 754 aa22.79■■□□□ 1.24
SRRM1-222ENST00000596378 DSELQ8IZU8 1212 aa22.79■■□□□ 1.24
SRRM1-222ENST00000596378 CCDC28BQ9BUN5 200 aa22.79■■□□□ 1.24
SRRM1-222ENST00000596378 F5H5T6 163 aa22.78■■□□□ 1.24
SRRM1-222ENST00000596378 TBC1D4O60343 1298 aa22.78■■□□□ 1.24
SRRM1-222ENST00000596378 RING1Q06587 406 aa22.78■■□□□ 1.24
SRRM1-222ENST00000596378 KLC1Q07866 573 aa22.78■■□□□ 1.24
SRRM1-222ENST00000596378 ZRSR2Q15696 482 aaKnown RBP22.78■■□□□ 1.24
SRRM1-222ENST00000596378 KLC3Q6P597 504 aa22.78■■□□□ 1.24
SRRM1-222ENST00000596378 AAGABQ6PD74 315 aa22.78■■□□□ 1.24
SRRM1-222ENST00000596378 TSPAN17Q96FV3 270 aa22.78■■□□□ 1.24
SRRM1-222ENST00000596378 PDFQ9HBH1 243 aa22.78■■□□□ 1.24
SRRM1-222ENST00000596378 LRFN2Q9ULH4 789 aa22.78■■□□□ 1.24
SRRM1-222ENST00000596378 ARVCFO00192 962 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 LIN7AO14910 233 aaPredicted RBP22.77■■□□□ 1.24
SRRM1-222ENST00000596378 INHAP05111 366 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 ZDHHC11BP0C7U3 371 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 MSX2P35548 267 aaPredicted RBP22.77■■□□□ 1.24
SRRM1-222ENST00000596378 MAPKAPK2P49137 400 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 SLC14A2Q15849 920 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 ZNF549Q6P9A3 640 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 RP9Q8TA86 221 aaKnown RBP22.77■■□□□ 1.24
SRRM1-222ENST00000596378 EXOC2Q96KP1 924 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 NSMCE3Q96MG7 304 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 ZBTB26Q9HCK0 441 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 ADAMTS6Q9UKP5 1117 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 CCDC162PA2VCL2 907 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 GJB5O95377 273 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 C1QTNF8P60827 252 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 DHDDSQ86SQ9 333 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 KYQ8NBH2 561 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 GABPB2Q8TAK5 448 aaPredicted RBP22.77■■□□□ 1.24
SRRM1-222ENST00000596378 EXT2Q93063 718 aa22.77■■□□□ 1.24
SRRM1-222ENST00000596378 ZFP37Q9Y6Q3 630 aaPredicted RBP22.77■■□□□ 1.24
SRRM1-222ENST00000596378 TBKBP1A7MCY6 615 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 CFLARO15519 480 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 GALTP07902 379 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 HOXD9P28356 352 aaPredicted RBP22.76■■□□□ 1.23
SRRM1-222ENST00000596378 RGRP47804 291 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 YBEYP58557 167 aaPredicted RBP22.76■■□□□ 1.23
SRRM1-222ENST00000596378 RPS24P62847 133 aaKnown RBP22.76■■□□□ 1.23
SRRM1-222ENST00000596378 ACAP2Q15057 778 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 LPCAT4Q643R3 524 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 CUZD1Q86UP6 607 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 USP13Q92995 863 aaPredicted RBP22.76■■□□□ 1.23
SRRM1-222ENST00000596378 MAELQ96JY0 434 aaKnown RBP22.76■■□□□ 1.23
SRRM1-222ENST00000596378 SMIM14Q96QK8 99 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 WISP3O95389 354 aaPredicted RBP22.76■■□□□ 1.23
SRRM1-222ENST00000596378 ENO3P13929 434 aaPredicted RBP22.76■■□□□ 1.23
SRRM1-222ENST00000596378 SP100P23497 879 aaPredicted RBP22.76■■□□□ 1.23
SRRM1-222ENST00000596378 PKNOX1P55347 436 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 CDC16Q13042 620 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 IL31Q6EBC2 164 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 RYBPQ8N488 228 aaPredicted RBP22.76■■□□□ 1.23
SRRM1-222ENST00000596378 RNF148Q8N7C7 305 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 PTERQ96BW5 349 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 FEM1CQ96JP0 617 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 CDRT15Q96T59 188 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 TSEN34Q9BSV6 310 aaKnown RBP22.76■■□□□ 1.23
SRRM1-222ENST00000596378 SPON2Q9BUD6 331 aa22.76■■□□□ 1.23
SRRM1-222ENST00000596378 ELAC1Q9H777 363 aaKnown RBP22.76■■□□□ 1.23
SRRM1-222ENST00000596378 STX16-NPEPL1H3BU86 382 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 CD3EAPO15446 510 aaKnown RBP22.75■■□□□ 1.23
SRRM1-222ENST00000596378 GLP2RO95838 553 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 RBP1P09455 135 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 COL6A1P12109 1028 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 RAG1P15918 1043 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 DPP6P42658 865 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 THOP1P52888 689 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 TIAL1Q01085 375 aaKnown RBP eCLIP22.75■■□□□ 1.23
SRRM1-222ENST00000596378 DSG1Q02413 1049 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 PPP1R3AQ16821 1122 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 TMEM154Q6P9G4 183 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 ISCA2Q86U28 154 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 NPAS2Q99743 824 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 ECSITQ9BQ95 431 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 TTPALQ9BTX7 342 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 NACA2Q9H009 215 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 DPPA5A6NC42 116 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 A6NHS1 94 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 TRPC5OSA6NMA1 111 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 UBFD1O14562 309 aaKnown RBP22.75■■□□□ 1.23
SRRM1-222ENST00000596378 TRPA1O75762 1119 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 SGSHP51688 502 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 IRGCQ6NXR0 463 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 GK5Q6ZS86 529 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 GALNT7Q86SF2 657 aa22.75■■□□□ 1.23
SRRM1-222ENST00000596378 SNX31Q8N9S9 440 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms