RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 RALGDSQ12967 914 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 C16orf72Q14CZ0 275 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 TPD52L1Q16890 204 aaPredicted RBP10.03□□□□□ -0.8
LIG1-209ENST00000596104 PARP15Q460N3 678 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 C14orf28Q4W4Y0 310 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 HSP90AA4PQ58FG1 418 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 BRAT1Q6PJG6 821 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 WDR59Q6PJI9 974 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 SLFN11Q7Z7L1 901 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 ZNF354CQ86Y25 554 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 DNAAF5Q86Y56 855 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 CAMK1DQ8IU85 385 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 UMODL1-AS1Q8N2C9 162 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 FAM46DQ8NEK8 389 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 OR56A4Q8NGH8 313 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 CCL4L1Q8NHW4 92 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 FUBP1Q96AE4 644 aaKnown RBP10.03□□□□□ -0.8
LIG1-209ENST00000596104 ZNF641Q96N77 438 aaPredicted RBP10.03□□□□□ -0.8
LIG1-209ENST00000596104 PCDHB18PQ96TA0 734 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 CMKLR1Q99788 373 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 NCAPGQ9BPX3 1015 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 FUCA2Q9BTY2 467 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 B3GNT4Q9C0J1 378 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 TMEM168Q9H0V1 697 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 GANQ9H2C0 597 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 SEMA6CQ9H3T2 930 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 MRPL40Q9NQ50 206 aaKnown RBP10.03□□□□□ -0.8
LIG1-209ENST00000596104 SEPT10Q9P0V9 454 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 LRIT1Q9P2V4 623 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 UBA2Q9UBT2 640 aaPredicted RBP10.03□□□□□ -0.8
LIG1-209ENST00000596104 ATP8A1Q9Y2Q0 1164 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 CHD5Q8TDI0 1954 aa10.03□□□□□ -0.8
LIG1-209ENST00000596104 BOD1L1Q8NFC6 3051 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 TCRBV5S1A1TA0A578 114 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 B4DGG1 531 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 TNFRSF10CO14798 259 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 B4GAT1O43505 415 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 NUDT21O43809 227 aaKnown RBP10.02□□□□□ -0.81
LIG1-209ENST00000596104 RECQL5O94762 991 aaPredicted RBP10.02□□□□□ -0.81
LIG1-209ENST00000596104 GFPT2O94808 682 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 HOXC4P09017 264 aaPredicted RBP10.02□□□□□ -0.81
LIG1-209ENST00000596104 KRT3P12035 628 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 UNGP13051 313 aaPredicted RBP10.02□□□□□ -0.81
LIG1-209ENST00000596104 GM2AP17900 193 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 GPD1P21695 349 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 CD82P27701 267 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 TRIM23P36406 574 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 RGRP47804 291 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 ARSDP51689 593 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 MAPK10P53779 464 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 CYP4F2P78329 520 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 B4GALNT1Q00973 533 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 GRM3Q14832 879 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 CLCA4Q14CN2 919 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 DPCR1Q3MIW9 517 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 EFHC2Q5JST6 749 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 COLEC12Q5KU26 742 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 SPECC1LQ69YQ0 1117 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 ERAP2Q6P179 960 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 TRIM72Q6ZMU5 477 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 TAF8Q7Z7C8 310 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 C17orf82Q86X59 251 aaPredicted RBP10.02□□□□□ -0.81
LIG1-209ENST00000596104 PELI3Q8N2H9 469 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 ECHDC3Q96DC8 303 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 TUBGCP5Q96RT8 1024 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 LGR4Q9BXB1 951 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 LRRC19Q9H756 370 aa10.02□□□□□ -0.81
LIG1-209ENST00000596104 GEMIN8Q9NWZ8 242 aaKnown RBP10.02□□□□□ -0.81
LIG1-209ENST00000596104 J3KR12 359 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 CACNB4O00305 520 aaPredicted RBP10.01□□□□□ -0.81
LIG1-209ENST00000596104 PES1O00541 588 aaKnown RBP10.01□□□□□ -0.81
LIG1-209ENST00000596104 EPHB6O15197 1021 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 CCP110O43303 1012 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 PRAMEF11O60813 436 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 CCL4P13236 92 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 KELP23276 732 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 ERCC5P28715 1186 aaPredicted RBP10.01□□□□□ -0.81
LIG1-209ENST00000596104 SOX5P35711 763 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 CSNK1DP48730 415 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 JAM2P57087 298 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 ARHGEF7Q14155 803 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 BECN1Q14457 450 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 NR1D2Q14995 579 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 MAP9Q49MG5 647 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 CFAP58Q5T655 872 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 PHF19Q5T6S3 580 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 AFMIDQ63HM1 303 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 LIPIQ6XZB0 460 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 ZNF574Q6ZN55 896 aaPredicted RBP10.01□□□□□ -0.81
LIG1-209ENST00000596104 ZNF438Q7Z4V0 828 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 ZSCAN1Q8NBB4 408 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 TSEN2Q8NCE0 465 aaKnown RBP10.01□□□□□ -0.81
LIG1-209ENST00000596104 C3orf20Q8ND61 904 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 SLC12A9Q9BXP2 914 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 SLC25A18Q9H1K4 315 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 DPEP2Q9H4A9 486 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 CATSPERBQ9H7T0 1116 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 RDH14Q9HBH5 336 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 SAMSN1Q9NSI8 373 aaKnown RBP10.01□□□□□ -0.81
LIG1-209ENST00000596104 ADAM22Q9P0K1 906 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms