RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 ERAP2Q6P179 960 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 LIPIQ6XZB0 460 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 TSPAN33Q86UF1 283 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 MFSD2AQ8NA29 543 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 CAMK1GQ96NX5 476 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 QKIQ96PU8 341 aaKnown RBP eCLIP15.45■□□□□ 0.06
USE1-206ENST00000595101 TDRD1Q9BXT4 1180 aaKnown RBP15.45■□□□□ 0.06
USE1-206ENST00000595101 BRD8Q9H0E9 1235 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 DNAAF2Q9NVR5 837 aaKnown RBP15.45■□□□□ 0.06
USE1-206ENST00000595101 AMACRQ9UHK6 382 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 TPX2Q9ULW0 747 aaKnown RBP15.45■□□□□ 0.06
USE1-206ENST00000595101 EFR3BQ9Y2G0 817 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 TRPM6Q9BX84 2022 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 NPIPB15A6NHN6 443 aaPredicted RBP15.44■□□□□ 0.06
USE1-206ENST00000595101 H7C0C1 242 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 TM7SF2O76062 418 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 PTMAP06454 111 aaKnown RBP15.44■□□□□ 0.06
USE1-206ENST00000595101 THEGLP0DJG4 465 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 ATXN8OSP0DMR3 200 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 CD59P13987 128 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 LHCGRP22888 699 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 ATP5OP48047 213 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 KLF1Q13351 362 aaPredicted RBP15.44■□□□□ 0.06
USE1-206ENST00000595101 SHBQ15464 509 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 RALGPS1Q5JS13 557 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 Q6ZSR6 202 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 NYAP1Q6ZVC0 841 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 BZW1Q7L1Q6 419 aaKnown RBP15.44■□□□□ 0.06
USE1-206ENST00000595101 REXO1L1PQ8IX06 675 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 ZNF567Q8N184 647 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 PELI3Q8N2H9 469 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 TP53I13Q8NBR0 393 aaPredicted RBP15.44■□□□□ 0.06
USE1-206ENST00000595101 SPOCK2Q92563 424 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 FUBP1Q96AE4 644 aaKnown RBP15.44■□□□□ 0.06
USE1-206ENST00000595101 TEKT5Q96M29 485 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 ASCC3Q8N3C0 2202 aaKnown RBP15.44■□□□□ 0.06
USE1-206ENST00000595101 GIPC1O14908 333 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 OPHN1O60890 802 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 HNF1BP35680 557 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 IGFALSP35858 605 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 POLR2LP62875 67 aaKnown RBP15.44■□□□□ 0.06
USE1-206ENST00000595101 WSCD2Q2TBF2 565 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 SLC45A4Q5BKX6 768 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 DENND2CQ68D51 928 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 RFLNAQ6ZTI6 216 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 DPPA4Q7L190 304 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 ABI3BPQ7Z7G0 1075 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 HTR3CQ8WXA8 447 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 IMP4Q96G21 291 aaKnown RBP15.44■□□□□ 0.06
USE1-206ENST00000595101 LENG8Q96PV6 779 aaPredicted RBP15.44■□□□□ 0.06
USE1-206ENST00000595101 TLR10Q9BXR5 811 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 ZDHHC5Q9C0B5 715 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 GLOD4Q9HC38 313 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 TRMT1Q9NXH9 659 aaKnown RBP15.44■□□□□ 0.06
USE1-206ENST00000595101 PHTF1Q9UMS5 762 aa15.44■□□□□ 0.06
USE1-206ENST00000595101 NRDCO43847 1150 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 RECQL5O94762 991 aaPredicted RBP15.43■□□□□ 0.06
USE1-206ENST00000595101 TJP3O95049 919 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 RBP3P10745 1247 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 NUDT1P36639 197 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 SUOXP51687 545 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 EIF3EP60228 445 aaKnown RBP15.43■□□□□ 0.06
USE1-206ENST00000595101 PUM1Q14671 1186 aaKnown RBP eCLIP15.43■□□□□ 0.06
USE1-206ENST00000595101 IRF4Q15306 451 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 CNGA3Q16281 694 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 PCSK7Q16549 785 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 ZNF542PQ5EBM4 170 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 PTAR1Q7Z6K3 402 aaPredicted RBP15.43■□□□□ 0.06
USE1-206ENST00000595101 PLA2G15Q8NCC3 412 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 LPCAT1Q8NF37 534 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 TADA1Q96BN2 335 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 SCRN2Q96FV2 425 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 KLHDC7BQ96G42 594 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 RTKNQ9BST9 563 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 PCDH9Q9HC56 1237 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 TM7SF3Q9NS93 570 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 PNMA8BQ9ULN7 279 aaPredicted RBP15.43■□□□□ 0.06
USE1-206ENST00000595101 PPIL1Q9Y3C6 166 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 HS3ST3A1Q9Y663 406 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 SPTBN2O15020 2390 aa15.43■□□□□ 0.06
USE1-206ENST00000595101 USP27XA6NNY8 438 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 SH3BP5O60239 455 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 ELFN1P0C7U0 828 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 NFKB1P19838 968 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 BNIP3Q12983 259 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 GALNT3Q14435 633 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 RPS6KA1Q15418 735 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 KCTD19Q17RG1 926 aaPredicted RBP15.42■□□□□ 0.06
USE1-206ENST00000595101 ZNF423Q2M1K9 1284 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 IL27RAQ6UWB1 636 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 PID1Q7Z2X4 250 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 GATAD2AQ86YP4 633 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 CBARPQ8N350 705 aaPredicted RBP15.42■□□□□ 0.06
USE1-206ENST00000595101 ATG4AQ8WYN0 398 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 ANP32BQ92688 251 aaKnown RBP15.42■□□□□ 0.06
USE1-206ENST00000595101 MCCC1Q96RQ3 725 aaPredicted RBP15.42■□□□□ 0.06
USE1-206ENST00000595101 ELF4Q99607 663 aaPredicted RBP15.42■□□□□ 0.06
USE1-206ENST00000595101 GORASP1Q9BQQ3 440 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 SLC25A51Q9H1U9 297 aa15.42■□□□□ 0.06
USE1-206ENST00000595101 USP29Q9HBJ7 922 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms