RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 LCN8Q6JVE9 175 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 RANBP10Q6VN20 620 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 LRRC49Q8IUZ0 686 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 MINDY1Q8N5J2 469 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 SPATA22Q8NHS9 363 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 ZNF512Q96ME7 567 aaPredicted RBP13.31□□□□□ -0.28
VRK3-209ENST00000594948 C9orf16Q9BUW7 83 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 GOLGA2P5Q9HBQ8 144 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 CD320Q9NPF0 282 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 PTPRDP23468 1912 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 SH3PXD2BA1X283 911 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 CCDC78A2IDD5 438 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 NEMP2A6NFY4 417 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 ZNF839A8K0R7 811 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 SOCS2O14508 198 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 TNPO2O14787 897 aaKnown RBP13.3□□□□□ -0.28
VRK3-209ENST00000594948 TIPRLO75663 272 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 PAPSS2O95340 614 aaPredicted RBP13.3□□□□□ -0.28
VRK3-209ENST00000594948 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 FCGR1AP12314 374 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 ATP6V1B2P21281 511 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 FGFR3P22607 806 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 SLC7A2P52569 658 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 DUSP28Q4G0W2 176 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 BRMS1LQ5PSV4 323 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 ZNF554Q86TJ5 538 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 GPR180Q86V85 440 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 FAM47BQ8NA70 645 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 USP33Q8TEY7 942 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 PPWD1Q96BP3 646 aaKnown RBP13.3□□□□□ -0.28
VRK3-209ENST00000594948 SGF29Q96ES7 293 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 CELF6Q96J87 481 aaKnown RBP13.3□□□□□ -0.28
VRK3-209ENST00000594948 YTHDF1Q9BYJ9 559 aaKnown RBP13.3□□□□□ -0.28
VRK3-209ENST00000594948 FAM49AQ9H0Q0 323 aaPredicted RBP13.3□□□□□ -0.28
VRK3-209ENST00000594948 CSNK1G1Q9HCP0 422 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 CHST12Q9NRB3 414 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 FAIMQ9NVQ4 179 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 SLC2A6Q9UGQ3 507 aa13.3□□□□□ -0.28
VRK3-209ENST00000594948 PIN4Q9Y237 131 aaKnown RBP13.3□□□□□ -0.28
VRK3-209ENST00000594948 PLOD2O00469 737 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 MAFKO60675 156 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 MT-CYBP00156 380 aaPredicted RBP13.29□□□□□ -0.28
VRK3-209ENST00000594948 IGLV3-25P01717 112 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 FGF4P08620 206 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 IL10P22301 178 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 KCNA5P22460 613 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 GALK1P51570 392 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 TMEM62Q0P6H9 643 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 EIF4EBP2Q13542 120 aaPredicted RBP13.29□□□□□ -0.28
VRK3-209ENST00000594948 ATP6AP1Q15904 470 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 PPP1R3AQ16821 1122 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 ZNF678Q5SXM1 525 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 CYP2R1Q6VVX0 501 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 GPRIN1Q7Z2K8 1008 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 SPRED1Q7Z699 444 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 TAC4Q86UU9 113 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 FUNDC1Q8IVP5 155 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 CLYBLQ8N0X4 340 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 SPATA6LQ8N4H0 392 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 TSPEARQ8WU66 669 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 CANT1Q8WVQ1 401 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 SMARCD1Q96GM5 515 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 CNDP2Q96KP4 475 aaKnown RBP13.29□□□□□ -0.28
VRK3-209ENST00000594948 DOK1Q99704 481 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 OLFM1Q99784 485 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 HIPK3Q9H422 1215 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 CATSPERBQ9H7T0 1116 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 TNFRSF12AQ9NP84 129 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 AGPAT4Q9NRZ5 378 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 ACTR3BQ9P1U1 418 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 FNIP2Q9P278 1114 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 CDH9Q9ULB4 789 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 GINS2Q9Y248 185 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 SNX10Q9Y5X0 201 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 GBF1Q92538 1859 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 DLGAP1O14490 977 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 MATN4O95460 622 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 GPIP06744 558 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 HOXB8P17481 243 aaPredicted RBP13.29□□□□□ -0.28
VRK3-209ENST00000594948 CKMT2P17540 419 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 EPHX2P34913 555 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 MRPL19P49406 292 aaKnown RBP13.29□□□□□ -0.28
VRK3-209ENST00000594948 MERTKQ12866 999 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 SNX17Q15036 470 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 SLC36A3Q495N2 470 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 RBM20Q5T481 1227 aaKnown RBP13.29□□□□□ -0.28
VRK3-209ENST00000594948 HECTD2Q5U5R9 776 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 MANEALQ5VSG8 457 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 AFMIDQ63HM1 303 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 KLHL35Q6PF15 583 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 CYHR1Q6ZMK1 362 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 Q6ZNX1 250 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 PTAR1Q7Z6K3 402 aaPredicted RBP13.29□□□□□ -0.28
VRK3-209ENST00000594948 ZNF354CQ86Y25 554 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 OR6J1Q8NGC5 347 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 FATE1Q969F0 183 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 ISOC1Q96CN7 298 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 C19orf60Q96EN9 201 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 MRGPRX2Q96LB1 330 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 PPP1R10Q96QC0 940 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms