RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 HNF1BP35680 557 aa17.83■□□□□ 0.44
SHKBP1-204ENST00000594862 DUSP3P51452 185 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-204ENST00000594862 SMAD1Q15797 465 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-204ENST00000594862 PROX2Q3B8N5 592 aa17.83■□□□□ 0.44
SHKBP1-204ENST00000594862 ARMC12Q5T9G4 340 aa17.83■□□□□ 0.44
SHKBP1-204ENST00000594862 ALG1LQ6GMV1 187 aa17.83■□□□□ 0.44
SHKBP1-204ENST00000594862 TMPRSS12Q86WS5 348 aa17.83■□□□□ 0.44
SHKBP1-204ENST00000594862 SLC25A45Q8N413 288 aa17.83■□□□□ 0.44
SHKBP1-204ENST00000594862 PGBD5Q8N414 524 aa17.83■□□□□ 0.44
SHKBP1-204ENST00000594862 ZNF548Q8NEK5 533 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-204ENST00000594862 TMEM121BQ9BXQ6 578 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-204ENST00000594862 NOD2Q9HC29 1040 aa17.83■□□□□ 0.44
SHKBP1-204ENST00000594862 DNPEPQ9ULA0 475 aa17.83■□□□□ 0.44
SHKBP1-204ENST00000594862 A0A0A6YYK5 440 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 TPP1O14773 563 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 SCAMP1O15126 338 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 PSTPIP1O43586 416 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 KRT1P04264 644 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 JUNDP17535 347 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 ITIH2P19823 946 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 KELP23276 732 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 VIPR1P32241 457 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 DAB2P98082 770 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 RALGDSQ12967 914 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 ZCCHC8Q6NZY4 707 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 LIPIQ6XZB0 460 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 CCNI2Q6ZMN8 369 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 USP45Q70EL2 814 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 CPNE8Q86YQ8 564 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 TMTC1Q8IUR5 882 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 PQLC3Q8N755 202 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 FAM181AQ8N9Y4 354 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 KDF1Q8NAX2 398 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 PDCD6IPQ8WUM4 868 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 RAPGEF5Q92565 580 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 SLC13A1Q9BZW2 595 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 BRD8Q9H0E9 1235 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 NT5MQ9NPB1 228 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 APOBEC3BQ9UH17 382 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 PCDHGC4Q9Y5F7 938 aa17.82■□□□□ 0.44
SHKBP1-204ENST00000594862 C1QTNF9BB2RNN3 333 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 PSMD11O00231 422 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 APOL1O14791 398 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 PPP1R12AO14974 1030 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 FFAR2O15552 330 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 AQP9O43315 295 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 SIGLEC6O43699 453 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 PGLSO95336 258 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 C1QTNF9P0C862 333 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 CCNB1P14635 433 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 NOP2P46087 812 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 MAXP61244 160 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 E2F1Q01094 437 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 PPARDQ03181 441 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 GBE1Q04446 702 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 ITKQ08881 620 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 NFATC4Q14934 902 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 WSCD2Q2TBF2 565 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 CCDC157Q569K6 752 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 SLC9A4Q6AI14 798 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 BZW1Q7L1Q6 419 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 CCDC13Q8IYE1 715 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 PHACTR4Q8IZ21 702 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 SDR16C5Q8N3Y7 309 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 FSTL5Q8N475 847 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 CCNYQ8ND76 341 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 SEMA3CQ99985 751 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 RBSNQ9H1K0 784 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 MBNL1Q9NR56 388 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 RBM22Q9NW64 420 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 UCKL1Q9NWZ5 548 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 DTLQ9NZJ0 730 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 B4GALT6Q9UBX8 382 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 DMXL2Q8TDJ6 3036 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 LRRK1Q38SD2 2015 aa17.81■□□□□ 0.44
SHKBP1-204ENST00000594862 PTPRBP23467 1997 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 CACNB4O00305 520 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 PDE2AO00408 941 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 TRIM38O00635 465 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 RECQL5O94762 991 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 RASGRP1O95267 797 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 CKMT1AP12532 417 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 KIAA1024LP59773 190 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 RPL26P61254 145 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 PPIDQ08752 370 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 TRAF2Q12933 501 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 EIF2B5Q13144 721 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 DNAJC3Q13217 504 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 ARHGEF7Q14155 803 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 TFDP2Q14188 446 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 ACOX1Q15067 660 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 PDK1Q15118 436 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 C11orf63Q6NUN7 778 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 DHRS13Q6UX07 377 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 TPCN2Q8NHX9 752 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 GLMNQ92990 594 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 SCRN2Q96FV2 425 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 MCCC1Q96RQ3 725 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 IL12RB2Q99665 862 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms