RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 GLT6D1Q7Z4J2 308 aa20.89■□□□□ 0.93
PNKP-203ENST00000593946 SFTPA1Q8IWL2 248 aa20.89■□□□□ 0.93
PNKP-203ENST00000593946 KDM1BQ8NB78 822 aa20.89■□□□□ 0.93
PNKP-203ENST00000593946 ECHDC3Q96DC8 303 aa20.89■□□□□ 0.93
PNKP-203ENST00000593946 ZDHHC6Q9H6R6 413 aa20.89■□□□□ 0.93
PNKP-203ENST00000593946 BRD9Q9H8M2 597 aa20.89■□□□□ 0.93
PNKP-203ENST00000593946 HACD3Q9P035 362 aa20.89■□□□□ 0.93
PNKP-203ENST00000593946 PLA2G4CQ9UP65 541 aa20.89■□□□□ 0.93
PNKP-203ENST00000593946 GOLGA8TH3BQL2 631 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 AURKAO14965 403 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 SIN3BO75182 1162 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 KRT37O76014 449 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 KRT38O76015 456 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 BMP1P13497 986 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 CREB1P16220 341 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 CNTFP26441 200 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 GP5P40197 560 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 RECQLP46063 649 aaPredicted RBP20.88■□□□□ 0.93
PNKP-203ENST00000593946 ZNF140P52738 457 aaPredicted RBP20.88■□□□□ 0.93
PNKP-203ENST00000593946 ST8SIA6P61647 398 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 ARFGAP2Q8N6H7 521 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 CHST14Q8NCH0 376 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 STYXQ8WUJ0 223 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 SPOCK2Q92563 424 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 ZNF641Q96N77 438 aaPredicted RBP20.88■□□□□ 0.93
PNKP-203ENST00000593946 TRABDQ9H4I3 376 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 SUV39H2Q9H5I1 410 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 IARS2Q9NSE4 1012 aaKnown RBP20.88■□□□□ 0.93
PNKP-203ENST00000593946 NSMCE4AQ9NXX6 385 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 ADAM21Q9UKJ8 722 aa20.88■□□□□ 0.93
PNKP-203ENST00000593946 ZNF106Q9H2Y7 1883 aaKnown RBP20.88■□□□□ 0.93
PNKP-203ENST00000593946 MYO10Q9HD67 2058 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 A0A1W2PPM1 405 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 HMX2A2RU54 273 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 MBTPS2O43462 519 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 SNRPAP09012 282 aaKnown RBP20.87■□□□□ 0.93
PNKP-203ENST00000593946 PSMA3P25788 255 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 ARSDP51689 593 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 LGSNQ5TDP6 509 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 ZSWIM9Q86XI8 627 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 DNAJC1Q96KC8 554 aaKnown RBP20.87■□□□□ 0.93
PNKP-203ENST00000593946 MAGEE1Q9HCI5 957 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 TXNDC16Q9P2K2 825 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 GGT7Q9UJ14 662 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 A0A0J9YYE9 177 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 C2CD4DB7Z1M9 353 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 SLC7A4O43246 635 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 TRBC1P01850 177 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 ATP1A2P50993 1020 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 CCDC85BQ15834 202 aaPredicted RBP20.87■□□□□ 0.93
PNKP-203ENST00000593946 PREPLQ4J6C6 727 aaPredicted RBP20.87■□□□□ 0.93
PNKP-203ENST00000593946 CNPY4Q8N129 248 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 TTC30BQ8N4P2 665 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 OR13C4Q8NGS5 318 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 PTPRN2Q92932 1015 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 MTBPQ96DY7 904 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 HEPHQ9BQS7 1158 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 MCMBPQ9BTE3 642 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 NLE1Q9NVX2 485 aaPredicted RBP20.87■□□□□ 0.93
PNKP-203ENST00000593946 WASF2Q9Y6W5 498 aa20.87■□□□□ 0.93
PNKP-203ENST00000593946 TBC1D3BA6NDS4 549 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 C2orf81A6NN90 581 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 TRIM49D1C9J1S8 452 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 BUD23O43709 281 aaKnown RBP20.86■□□□□ 0.93
PNKP-203ENST00000593946 KAT7O95251 611 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 GRIA2P42262 883 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 ABL2P42684 1182 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 PTPRCAPQ14761 206 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 PTPRRQ15256 657 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 AAK1Q2M2I8 961 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 GRTP1Q5TC63 336 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 STRA8Q7Z7C7 330 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 HDAC10Q969S8 669 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 RBBP8Q99708 897 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 FAM167BQ9BTA0 163 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 MFSD1Q9H3U5 465 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 F5P12259 2224 aa20.86■□□□□ 0.93
PNKP-203ENST00000593946 RPP40O75818 363 aaKnown RBP20.85■□□□□ 0.93
PNKP-203ENST00000593946 UGT2B4P06133 528 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 ALPIP09923 528 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 BRAFP15056 766 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 CTPS1P17812 591 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 LPOP22079 712 aaPredicted RBP20.85■□□□□ 0.93
PNKP-203ENST00000593946 CSE1LP55060 971 aaKnown RBP20.85■□□□□ 0.93
PNKP-203ENST00000593946 PRAMEP78395 509 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 PDE1BQ01064 536 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 THOC5Q13769 683 aaKnown RBP20.85■□□□□ 0.93
PNKP-203ENST00000593946 BMPR2Q13873 1038 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 ZNF234Q14588 700 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 FNDC3BQ53EP0 1204 aaKnown RBP20.85■□□□□ 0.93
PNKP-203ENST00000593946 PRPF38BQ5VTL8 546 aaKnown RBP20.85■□□□□ 0.93
PNKP-203ENST00000593946 NEPROQ6NW34 567 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 UCMAQ8WVF2 138 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 TBATAQ96M53 351 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 CDX2Q99626 313 aaPredicted RBP20.85■□□□□ 0.93
PNKP-203ENST00000593946 MTG2Q9H4K7 406 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 CNOT10Q9H9A5 744 aaKnown RBP20.85■□□□□ 0.93
PNKP-203ENST00000593946 PHTF1Q9UMS5 762 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 PPIL1Q9Y3C6 166 aa20.85■□□□□ 0.93
PNKP-203ENST00000593946 ZNF711Q9Y462 761 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms