RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 CYP1A2P05177 515 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 RARAP10276 462 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 ALPPL2P10696 532 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 XPAP23025 273 aaPredicted RBP13.3□□□□□ -0.28
H3F3B-213ENST00000593254 ARL4AP40617 200 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 YPEL5P62699 121 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 SKOR1P84550 965 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 SLC25A11Q02978 314 aaKnown RBP13.3□□□□□ -0.28
H3F3B-213ENST00000593254 NSUN2Q08J23 767 aaKnown RBP eCLIP13.3□□□□□ -0.28
H3F3B-213ENST00000593254 RFTN1Q14699 578 aaPredicted RBP13.3□□□□□ -0.28
H3F3B-213ENST00000593254 TXNRD3NBQ6F5E7 133 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 ALKBH5Q6P6C2 394 aaKnown RBP13.3□□□□□ -0.28
H3F3B-213ENST00000593254 INO80CQ6PI98 192 aaPredicted RBP13.3□□□□□ -0.28
H3F3B-213ENST00000593254 POLNQ7Z5Q5 900 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 SRLQ86TD4 932 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 ZSWIM9Q86XI8 627 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 CAMK1DQ8IU85 385 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 TP53INP2Q8IXH6 220 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 TP53I13Q8NBR0 393 aaPredicted RBP13.3□□□□□ -0.28
H3F3B-213ENST00000593254 ZNF548Q8NEK5 533 aaPredicted RBP13.3□□□□□ -0.28
H3F3B-213ENST00000593254 TEKT4Q8WW24 435 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 DEPDC7Q96QD5 511 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 PSKH2Q96QS6 385 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 WRAP53Q9BUR4 548 aaKnown RBP13.3□□□□□ -0.28
H3F3B-213ENST00000593254 NUP85Q9BW27 656 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 CINPQ9BW66 212 aaPredicted RBP13.3□□□□□ -0.28
H3F3B-213ENST00000593254 C1QTNF7Q9BXJ2 289 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 ATP13A3Q9H7F0 1226 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 PCDH12Q9NPG4 1184 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.3□□□□□ -0.28
H3F3B-213ENST00000593254 ETNK2Q9NVF9 386 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 IP6K2Q9UHH9 426 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 ANAPC7Q9UJX3 599 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 NENFQ9UMX5 172 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 H3BM21 787 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 K7ESM1 405 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 TOR1BO14657 336 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 RIOK3O14730 519 aaKnown RBP13.29□□□□□ -0.28
H3F3B-213ENST00000593254 MUSKO15146 869 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 NEBLO76041 1014 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 CKMT1AP12532 417 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 JUNDP17535 347 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 AMPD1P23109 780 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 SERPINA4P29622 427 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 HNRNPH3P31942 346 aaKnown RBP13.29□□□□□ -0.28
H3F3B-213ENST00000593254 CASP14P31944 242 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 MMP12P39900 470 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 THOP1P52888 689 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 DAB2P98082 770 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 EIF2B5Q13144 721 aaKnown RBP13.29□□□□□ -0.28
H3F3B-213ENST00000593254 AGERQ15109 404 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 CFAP58Q5T655 872 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 TMCO4Q5TGY1 634 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 TMCO3Q6UWJ1 677 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 HSPH1Q92598 858 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 ECHDC3Q96DC8 303 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 BTBD6Q96KE9 485 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 APOLD1Q96LR9 279 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 ZNF599Q96NL3 588 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 CSPG4P5Q96PW8 444 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 DUSP23Q9BVJ7 150 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 XPO4Q9C0E2 1151 aaKnown RBP13.29□□□□□ -0.28
H3F3B-213ENST00000593254 MBNL1Q9NR56 388 aaKnown RBP13.29□□□□□ -0.28
H3F3B-213ENST00000593254 THSD1Q9NS62 852 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 PNMA8BQ9ULN7 279 aaPredicted RBP13.29□□□□□ -0.28
H3F3B-213ENST00000593254 ATP8A1Q9Y2Q0 1164 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 CSNK1G3Q9Y6M4 447 aa13.29□□□□□ -0.28
H3F3B-213ENST00000593254 SPTAN1Q13813 2472 aaKnown RBP13.29□□□□□ -0.28
H3F3B-213ENST00000593254 LY6G6EA0A0G2JKS1 128 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 MYO1FO00160 1098 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 AQP9O43315 295 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 CSO75390 466 aaKnown RBP13.28□□□□□ -0.28
H3F3B-213ENST00000593254 PEX11BO96011 259 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 TPM3P06753 285 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 GP1BAP07359 652 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 KRT10P13645 584 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 AP1S1P61966 158 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 BCL2L1Q07817 233 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 SLC10A7Q0GE19 358 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 PTK2BQ14289 1009 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 LBRQ14739 615 aaKnown RBP13.28□□□□□ -0.28
H3F3B-213ENST00000593254 LRRC14Q15048 493 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 IRF4Q15306 451 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 NFKBIBQ15653 356 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 WSCD2Q2TBF2 565 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 SKOR2Q2VWA4 1001 aaPredicted RBP13.28□□□□□ -0.28
H3F3B-213ENST00000593254 CCDC122Q5T0U0 273 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 ERAP2Q6P179 960 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 MACC1Q6ZN28 852 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 BTN2A2Q8WVV5 523 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 SPOCK2Q92563 424 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 TBATAQ96M53 351 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 NSMCE3Q96MG7 304 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 USP29Q9HBJ7 922 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 PCDH18Q9HCL0 1135 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 SEPT3Q9UH03 358 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 IL17BQ9UHF5 180 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 COQ6Q9Y2Z9 468 aa13.28□□□□□ -0.28
H3F3B-213ENST00000593254 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.28□□□□□ -0.28
H3F3B-213ENST00000593254 U3KQA8 63 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms