RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 PLA2G15Q8NCC3 412 aa16.17■□□□□ 0.18
CIRBP-240ENST00000592815 CPLX3Q8WVH0 158 aa16.17■□□□□ 0.18
CIRBP-240ENST00000592815 NAT6Q93015 286 aa16.17■□□□□ 0.18
CIRBP-240ENST00000592815 ECHDC3Q96DC8 303 aa16.17■□□□□ 0.18
CIRBP-240ENST00000592815 PSKH2Q96QS6 385 aa16.17■□□□□ 0.18
CIRBP-240ENST00000592815 POLR1BQ9H9Y6 1135 aa16.17■□□□□ 0.18
CIRBP-240ENST00000592815 CBX8Q9HC52 389 aa16.17■□□□□ 0.18
CIRBP-240ENST00000592815 ETNK2Q9NVF9 386 aa16.17■□□□□ 0.18
CIRBP-240ENST00000592815 SIRPGQ9P1W8 387 aa16.17■□□□□ 0.18
CIRBP-240ENST00000592815 KLQ9UEF7 1012 aa16.17■□□□□ 0.18
CIRBP-240ENST00000592815 BZW2Q9Y6E2 419 aaKnown RBP16.17■□□□□ 0.18
CIRBP-240ENST00000592815 SYCE3A1L190 88 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 TRAFD1O14545 582 aaPredicted RBP16.16■□□□□ 0.18
CIRBP-240ENST00000592815 TNFP01375 233 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 ALPIP09923 528 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 RARAP10276 462 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 AP1S1P61966 158 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 RALGDSQ12967 914 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 MTM1Q13496 603 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 PIGHQ14442 188 aaPredicted RBP16.16■□□□□ 0.18
CIRBP-240ENST00000592815 LVRNQ6Q4G3 990 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 TMCO3Q6UWJ1 677 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 LIPIQ6XZB0 460 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 RBM44Q6ZP01 1051 aaKnown RBP16.16■□□□□ 0.18
CIRBP-240ENST00000592815 LUZP1Q86V48 1076 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 ATL2Q8NHH9 583 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 SYN2Q92777 582 aaPredicted RBP16.16■□□□□ 0.18
CIRBP-240ENST00000592815 ATXN7L3BQ96GX2 97 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 NAF1Q96HR8 494 aaKnown RBP16.16■□□□□ 0.18
CIRBP-240ENST00000592815 BTBD6Q96KE9 485 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 WDR92Q96MX6 357 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 ZNF578Q96N58 590 aaPredicted RBP16.16■□□□□ 0.18
CIRBP-240ENST00000592815 ZNF599Q96NL3 588 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 BBC3Q96PG8 261 aaPredicted RBP16.16■□□□□ 0.18
CIRBP-240ENST00000592815 CSPG4P5Q96PW8 444 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 THAP2Q9H0W7 228 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 PRORYQ9H606 182 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.16■□□□□ 0.18
CIRBP-240ENST00000592815 GPR34Q9UPC5 381 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 PCDHGC4Q9Y5F7 938 aa16.16■□□□□ 0.18
CIRBP-240ENST00000592815 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.15■□□□□ 0.18
CIRBP-240ENST00000592815 A0A1W2PQJ5 194 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 CASC3O15234 703 aaKnown RBP16.15■□□□□ 0.18
CIRBP-240ENST00000592815 ELFN1P0C7U0 828 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 UBASH3AP57075 661 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 ZNF235Q14590 738 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 ACOX1Q15067 660 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 NFKBIBQ15653 356 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 KCTD16Q68DU8 428 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 TXNRD3NBQ6F5E7 133 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 DPPA4Q7L190 304 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 GKN2Q86XP6 184 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 SPACA3Q8IXA5 215 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 ARL10Q8N8L6 244 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 PCDH19Q8TAB3 1148 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 PDCD6IPQ8WUM4 868 aaKnown RBP16.15■□□□□ 0.18
CIRBP-240ENST00000592815 CCDC3Q9BQI4 270 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 IP6K2Q9UHH9 426 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 SATB2Q9UPW6 733 aa16.15■□□□□ 0.18
CIRBP-240ENST00000592815 TMEM202A6NGA9 273 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 EIF4E1BA6NMX2 242 aaKnown RBP16.14■□□□□ 0.17
CIRBP-240ENST00000592815 CACNB4O00305 520 aaPredicted RBP16.14■□□□□ 0.17
CIRBP-240ENST00000592815 MAFKO60675 156 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 TCEA3O75764 348 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 DXOO77932 396 aaKnown RBP16.14■□□□□ 0.17
CIRBP-240ENST00000592815 PEX11BO96011 259 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 SERPING1P05155 500 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 PBX1P40424 430 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 PCBP4P57723 403 aaKnown RBP16.14■□□□□ 0.17
CIRBP-240ENST00000592815 ZBED6P86452 979 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 TLE3Q04726 772 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 C3orf38Q5JPI3 329 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 SDR16C5Q8N3Y7 309 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 PGBD5Q8N414 524 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 KYQ8NBH2 561 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 ZNF248Q8NDW4 579 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 OR1E3Q8WZA6 343 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 FUBP1Q96AE4 644 aaKnown RBP16.14■□□□□ 0.17
CIRBP-240ENST00000592815 GRAMD1AQ96CP6 724 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 HIC2Q96JB3 615 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 LGMNQ99538 433 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 NUP85Q9BW27 656 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 SYNDIG1Q9H7V2 258 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 NOD2Q9HC29 1040 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 PCDH18Q9HCL0 1135 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 B4GALT6Q9UBX8 382 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 ANAPC7Q9UJX3 599 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 CAPN11Q9UMQ6 739 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 ENTPD2Q9Y5L3 495 aa16.14■□□□□ 0.17
CIRBP-240ENST00000592815 FASNP49327 2511 aaKnown RBP16.14■□□□□ 0.17
CIRBP-240ENST00000592815 LOC400499M0QZD8 3231 aa16.13■□□□□ 0.17
CIRBP-240ENST00000592815 A0A087X0T9 212 aa16.13■□□□□ 0.17
CIRBP-240ENST00000592815 A0A1W2PNU3 283 aaPredicted RBP16.13■□□□□ 0.17
CIRBP-240ENST00000592815 CYP1A2P05177 515 aa16.13■□□□□ 0.17
CIRBP-240ENST00000592815 FAM228BP0C875 321 aa16.13■□□□□ 0.17
CIRBP-240ENST00000592815 GM2AP17900 193 aa16.13■□□□□ 0.17
CIRBP-240ENST00000592815 RBMS1P29558 406 aaKnown RBP16.13■□□□□ 0.17
CIRBP-240ENST00000592815 HSPA9P38646 679 aaKnown RBP16.13■□□□□ 0.17
CIRBP-240ENST00000592815 SSR1P43307 286 aaKnown RBP16.13■□□□□ 0.17
CIRBP-240ENST00000592815 KIAA1024LP59773 190 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms