RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 SOCS5O75159 536 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 GCATO75600 419 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 RECQL5O94762 991 aaPredicted RBP13.94□□□□□ -0.18
APOC1-208ENST00000592535 CPP00450 1065 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 ELFN1P0C7U0 828 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 GM2AP17900 193 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 GARSP41250 739 aaKnown RBP13.94□□□□□ -0.18
APOC1-208ENST00000592535 PEX5P50542 639 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 INSM1Q01101 510 aaPredicted RBP13.94□□□□□ -0.18
APOC1-208ENST00000592535 PPARDQ03181 441 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 TARDBPQ13148 414 aaKnown RBP eCLIP13.94□□□□□ -0.18
APOC1-208ENST00000592535 TBX2Q13207 712 aaPredicted RBP13.94□□□□□ -0.18
APOC1-208ENST00000592535 INPP5AQ14642 412 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 NFATC4Q14934 902 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 PRRT3Q5FWE3 981 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 ZFYVE27Q5T4F4 411 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 FAXCQ5TGI0 409 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 CNGA4Q8IV77 575 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 TEX26Q8N6G2 289 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 PQLC3Q8N755 202 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 PDCD7Q8N8D1 485 aaKnown RBP13.94□□□□□ -0.18
APOC1-208ENST00000592535 FAM181AQ8N9Y4 354 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 PLA2G15Q8NCC3 412 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 RFFLQ8WZ73 363 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 SPOCK2Q92563 424 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 FAF2Q96CS3 445 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 APOOQ9BUR5 198 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 NT5MQ9NPB1 228 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 SPASTQ9UBP0 616 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 OR1A2Q9Y585 309 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 ASXL3Q9C0F0 2248 aa13.94□□□□□ -0.18
APOC1-208ENST00000592535 A0A1W2PQ67 120 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 AKR1B15C9JRZ8 316 aaPredicted RBP13.93□□□□□ -0.18
APOC1-208ENST00000592535 TPP1O14773 563 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 CELA2BP08218 269 aaPredicted RBP13.93□□□□□ -0.18
APOC1-208ENST00000592535 KDELR1P24390 212 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 E2F1Q01094 437 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 CYP4F3Q08477 520 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 MTM1Q13496 603 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 ALG11Q2TAA5 492 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 RALGPS1Q5JS13 557 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 ZCCHC8Q6NZY4 707 aaKnown RBP13.93□□□□□ -0.18
APOC1-208ENST00000592535 SARM1Q6SZW1 724 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 ENPP7Q6UWV6 458 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 LRRC49Q8IUZ0 686 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 MAP7D3Q8IWC1 876 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 LRRN4Q8WUT4 740 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 RAPGEF5Q92565 580 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 MAML1Q92585 1016 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 TSACCQ96A04 125 aaPredicted RBP13.93□□□□□ -0.18
APOC1-208ENST00000592535 TBATAQ96M53 351 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 IL12RB2Q99665 862 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 SEMA3CQ99985 751 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 SLC13A1Q9BZW2 595 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 CLPBQ9H078 707 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 DKK4Q9UBT3 224 aa13.93□□□□□ -0.18
APOC1-208ENST00000592535 COL27A1Q8IZC6 1860 aaPredicted RBP13.93□□□□□ -0.18
APOC1-208ENST00000592535 RP1P56715 2156 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 MTA2O94776 668 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 PGLSO95336 258 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 TSHRP16473 764 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 HTR1BP28222 390 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 VIPR1P32241 457 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 DUSP3P51452 185 aaPredicted RBP13.92□□□□□ -0.18
APOC1-208ENST00000592535 HK3P52790 923 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 GBE1Q04446 702 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 ITKQ08881 620 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 SLC10A2Q12908 348 aaPredicted RBP13.92□□□□□ -0.18
APOC1-208ENST00000592535 ACOX1Q15067 660 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 PTPRRQ15256 657 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 TCEA2Q15560 299 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 CNGA3Q16281 694 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 IFI16Q16666 785 aaKnown RBP13.92□□□□□ -0.18
APOC1-208ENST00000592535 CDKN3Q16667 212 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 KCTD16Q68DU8 428 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 TIGD7Q6NT04 549 aaPredicted RBP13.92□□□□□ -0.18
APOC1-208ENST00000592535 RD3Q7Z3Z2 195 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 HID1Q8IV36 788 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 RHOT2Q8IXI1 618 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 PELI3Q8N2H9 469 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 COQ10AQ96MF6 247 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 TSGA13Q96PP4 275 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 RNF157Q96PX1 679 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 TRIM5Q9C035 493 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 USP29Q9HBJ7 922 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 EVA1BQ9NVM1 165 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 KLQ9UEF7 1012 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 SALL4Q9UJQ4 1053 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 PHTF1Q9UMS5 762 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 CLCA2Q9UQC9 943 aa13.92□□□□□ -0.18
APOC1-208ENST00000592535 ASPMQ8IZT6 3477 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 CPED1A4D0V7 1026 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 LRRD1A4D1F6 860 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 NPIPB15A6NHN6 443 aaPredicted RBP13.91□□□□□ -0.18
APOC1-208ENST00000592535 LMO7DNF2Z398 122 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 MATN3O15232 486 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 YY2O15391 372 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 OPA1O60313 960 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 HEXIM1O94992 359 aaKnown RBP13.91□□□□□ -0.18
APOC1-208ENST00000592535 RASGRP1O95267 797 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms