RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	GLB1	P16278	677 aa		18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	GM2A	P17900	193 aa		18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	RGR	P47804	291 aa		18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	GSC	P56915	257 aa	Predicted RBP	18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	YBEY	P58557	167 aa	Predicted RBP	18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	RALGDS	Q12967	914 aa		18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	MTM1	Q13496	603 aa		18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	BECN1	Q14457	450 aa		18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	WDR59	Q6PJI9	974 aa		18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	SLFN11	Q7Z7L1	901 aa		18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	CAMK1D	Q8IU85	385 aa		18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	UMODL1-AS1	Q8N2C9	162 aa		18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	FAM117A	Q9C073	453 aa		18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	TCRBV5S1A1T	A0A578	114 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412		J3KR12	359 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	EPHB6	O15197	1021 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	CCP110	O43303	1012 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	TNF	P01375	233 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	KRT3	P12035	628 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	XPA	P23025	273 aa	Predicted RBP	18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	JAM2	P57087	298 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	CYP4F2	P78329	520 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	HLTF	Q14527	1009 aa	Known RBP eCLIP	18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	PARP15	Q460N3	678 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	XKR5	Q6UX68	686 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	DNAAF5	Q86Y56	855 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	PELI3	Q8N2H9	469 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	CCL4L1	Q8NHW4	92 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	NCAPG	Q9BPX3	1015 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	TMEM168	Q9H0V1	697 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	LRRC19	Q9H756	370 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	ATP8A1	Q9Y2Q0	1164 aa		18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	HEMK1	Q9Y5R4	338 aa	Predicted RBP	18.39	■□□□□ 0.53
CIRBP-238	ENST00000592412	PES1	O00541	588 aa	Known RBP	18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	SUV39H1	O43463	412 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	PNLIP	P16233	465 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	GPD1	P21695	349 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	KIAA1024L	P59773	190 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	C16orf72	Q14CZ0	275 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	TBR1	Q16650	682 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	C14orf28	Q4W4Y0	310 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	FAM46D	Q8NEK8	389 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	OR56A4	Q8NGH8	313 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	USP7	Q93009	1102 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	NSMCE3	Q96MG7	304 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	LGR4	Q9BXB1	951 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	SEMA6C	Q9H3T2	930 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	LRIT1	Q9P2V4	623 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	UBA2	Q9UBT2	640 aa	Predicted RBP	18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412	FZD10	Q9ULW2	581 aa		18.38	■□□□□ 0.53
CIRBP-238	ENST00000592412		B4DGG1	531 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	CREB3	O43889	395 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	RECQL5	O94762	991 aa	Predicted RBP	18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	ERCC5	P28715	1186 aa	Predicted RBP	18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	TRIM23	P36406	574 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	ARSD	P51689	593 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	MAPK10	P53779	464 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	UBE2H	P62256	183 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	B4GALNT1	Q00973	533 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	TCP11X2	Q5H9J9	407 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	EFHC2	Q5JST6	749 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	MANEA	Q5SRI9	462 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	ERAP2	Q6P179	960 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	BRAT1	Q6PJG6	821 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	TAF8	Q7Z7C8	310 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	C3orf20	Q8ND61	904 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	ATL2	Q8NHH9	583 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	ZNF641	Q96N77	438 aa	Predicted RBP	18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	SEMA3C	Q99985	751 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	ARHGAP9	Q9BRR9	750 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	FUCA2	Q9BTY2	467 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	TAB2	Q9NYJ8	693 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	ADAM22	Q9P0K1	906 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412	SDK2	Q58EX2	2172 aa		18.37	■□□□□ 0.53
CIRBP-238	ENST00000592412		A0A1W2PQC6	194 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	B4GAT1	O43505	415 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	PRAMEF11	O60813	436 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	UTP20	O75691	2785 aa	Known RBP	18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	SOX5	P35711	763 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	POLR2F	P61218	127 aa	Known RBP	18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	CLCA4	Q14CN2	919 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	CLEC16A	Q2KHT3	1053 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	SPECC1L	Q69YQ0	1117 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	LIPI	Q6XZB0	460 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	MON1B	Q7L1V2	547 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	C17orf82	Q86X59	251 aa	Predicted RBP	18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	PHF13	Q86YI8	300 aa	Predicted RBP	18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	TSEN2	Q8NCE0	465 aa	Known RBP	18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	PMEPA1	Q969W9	287 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	TMEM159	Q96B96	161 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	ECHDC3	Q96DC8	303 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	CELF6	Q96J87	481 aa	Known RBP	18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	RDH14	Q9HBH5	336 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	NBPF19	A0A087WUL8	3843 aa		18.36	■□□□□ 0.53
CIRBP-238	ENST00000592412	CFAP69	A5D8W1	941 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	SIGLEC16	A6NMB1	481 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	NUDT21	O43809	227 aa	Known RBP	18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	HOXC4	P09017	264 aa	Predicted RBP	18.35	■□□□□ 0.53

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