RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ARL14Q8N4G2 192 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 TSEN2Q8NCE0 465 aaKnown RBP18.98■□□□□ 0.63
CCDC43-205ENST00000592333 KCNE4Q8WWG9 221 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 LIN37Q96GY3 246 aaPredicted RBP18.98■□□□□ 0.63
CCDC43-205ENST00000592333 CELF6Q96J87 481 aaKnown RBP18.98■□□□□ 0.63
CCDC43-205ENST00000592333 RBM15Q96T37 977 aaKnown RBP eCLIP18.98■□□□□ 0.63
CCDC43-205ENST00000592333 CCDC3Q9BQI4 270 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 HAUS4Q9H6D7 363 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 SP110Q9HB58 689 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 KLQ9UEF7 1012 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 SEPT3Q9UH03 358 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 SATB2Q9UPW6 733 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 COL27A1Q8IZC6 1860 aaPredicted RBP18.97■□□□□ 0.63
CCDC43-205ENST00000592333 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.97■□□□□ 0.63
CCDC43-205ENST00000592333 ERVH48-1M5A8F1 160 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 TNFP01375 233 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 PNLIPP16233 465 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 TRIM23P36406 574 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 RHDQ02161 417 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 CA9Q16790 459 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 BOLA3Q53S33 107 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 FIGNQ5HY92 759 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 RALGPS1Q5JS13 557 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 PERM1Q5SV97 790 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 HID1Q8IV36 788 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 NETO2Q8NC67 525 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 ATXN7L3BQ96GX2 97 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 KCTD15Q96SI1 283 aaPredicted RBP18.97■□□□□ 0.63
CCDC43-205ENST00000592333 GPATCH2LQ9NWQ4 482 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 CNOT8Q9UFF9 292 aaKnown RBP18.97■□□□□ 0.63
CCDC43-205ENST00000592333 PCSK1NQ9UHG2 260 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 COQ6Q9Y2Z9 468 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 SHROOM3Q8TF72 1996 aa18.97■□□□□ 0.63
CCDC43-205ENST00000592333 CCDC187A0A096LP49 1063 aa18.96■□□□□ 0.63
CCDC43-205ENST00000592333 CDRT15L2A8MXV6 281 aa18.96■□□□□ 0.63
CCDC43-205ENST00000592333 TMCO5BA8MYB1 307 aa18.96■□□□□ 0.63
CCDC43-205ENST00000592333 CACNB4O00305 520 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-205ENST00000592333 PDE2AO00408 941 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-205ENST00000592333 TRAFD1O14545 582 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-205ENST00000592333 LRCH4O75427 683 aa18.96■□□□□ 0.63
CCDC43-205ENST00000592333 DPYSQ14117 519 aa18.96■□□□□ 0.63
CCDC43-205ENST00000592333 DPYSL2Q16555 572 aa18.96■□□□□ 0.63
CCDC43-205ENST00000592333 C3orf38Q5JPI3 329 aa18.96■□□□□ 0.63
CCDC43-205ENST00000592333 OGFOD3Q6PK18 319 aa18.96■□□□□ 0.63
CCDC43-205ENST00000592333 LIPIQ6XZB0 460 aa18.96■□□□□ 0.63
CCDC43-205ENST00000592333 CYP4V2Q6ZWL3 525 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-205ENST00000592333 DPPA4Q7L190 304 aa18.96■□□□□ 0.63
CCDC43-205ENST00000592333 ZNF571Q7Z3V5 609 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-205ENST00000592333 CLEC14AQ86T13 490 aa18.96■□□□□ 0.63
CCDC43-205ENST00000592333 PRR11Q96HE9 360 aaPredicted RBP18.96■□□□□ 0.63
CCDC43-205ENST00000592333 PEBP4Q96S96 227 aa18.96■□□□□ 0.63
CCDC43-205ENST00000592333 ISCUQ9H1K1 167 aa18.96■□□□□ 0.63
CCDC43-205ENST00000592333 BZW2Q9Y6E2 419 aaKnown RBP18.96■□□□□ 0.63
CCDC43-205ENST00000592333 A0A1B0GTH6 734 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 SOCS5O75159 536 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 RECQL5O94762 991 aaPredicted RBP18.95■□□□□ 0.62
CCDC43-205ENST00000592333 ITGA2BP08514 1039 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 ELFN1P0C7U0 828 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 ARL4AP40617 200 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 RGRP47804 291 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 CXADRP78310 365 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 KLHL30Q0D2K2 578 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 RALGDSQ12967 914 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 LBRQ14739 615 aaKnown RBP18.95■□□□□ 0.62
CCDC43-205ENST00000592333 TSR1Q2NL82 804 aaKnown RBP18.95■□□□□ 0.62
CCDC43-205ENST00000592333 ANO6Q4KMQ2 910 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 PPP6R3Q5H9R7 873 aaPredicted RBP18.95■□□□□ 0.62
CCDC43-205ENST00000592333 ZSWIM9Q86XI8 627 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 BBS5Q8N3I7 341 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 GPR156Q8NFN8 814 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 OR56A4Q8NGH8 313 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 PCDH19Q8TAB3 1148 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 TSACCQ96A04 125 aaPredicted RBP18.95■□□□□ 0.62
CCDC43-205ENST00000592333 CWC15Q9P013 229 aaKnown RBP18.95■□□□□ 0.62
CCDC43-205ENST00000592333 APPL1Q9UKG1 709 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 GPR34Q9UPC5 381 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 OR1A2Q9Y585 309 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 LRRK1Q38SD2 2015 aa18.95■□□□□ 0.62
CCDC43-205ENST00000592333 KALRNO60229 2985 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 RP1P56715 2156 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 H3BRJ5 948 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 DFFAO00273 331 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 DDX3XO00571 662 aaKnown RBP eCLIP18.94■□□□□ 0.62
CCDC43-205ENST00000592333 HTRA2O43464 458 aaPredicted RBP18.94■□□□□ 0.62
CCDC43-205ENST00000592333 SCNN1BP51168 640 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 PDX1P52945 283 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 PIGHQ14442 188 aaPredicted RBP18.94■□□□□ 0.62
CCDC43-205ENST00000592333 LRRC49Q8IUZ0 686 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 NPWQ8N729 165 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 TMEM159Q96B96 161 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 ZNF653Q96CK0 615 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 TMEM74Q96NL1 305 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 STRADBQ9C0K7 418 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 GULP1Q9UBP9 304 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 PCDHGA7Q9Y5G6 932 aa18.94■□□□□ 0.62
CCDC43-205ENST00000592333 A0A1W2PNU3 283 aaPredicted RBP18.93■□□□□ 0.62
CCDC43-205ENST00000592333 ATMINO43313 823 aaPredicted RBP18.93■□□□□ 0.62
CCDC43-205ENST00000592333 PCCBP05166 539 aa18.93■□□□□ 0.62
CCDC43-205ENST00000592333 GLB1P16278 677 aa18.93■□□□□ 0.62
CCDC43-205ENST00000592333 CR2P20023 1033 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms