RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 SLC6A17Q9H1V8 727 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 RETREG1Q9H6L5 497 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 ZDHHC6Q9H6R6 413 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 PRMT8Q9NR22 394 aaPredicted RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 DTLQ9NZJ0 730 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 DLGAP2Q9P1A6 1054 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 SUSD2Q9UGT4 822 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 IPO11Q9UI26 975 aaKnown RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 SLCO3A1Q9UIG8 710 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 G3BP2Q9UN86 482 aaKnown RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 HS3ST2Q9Y278 367 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 CACNA1IQ9P0X4 2223 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 CACNA1HO95180 2353 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 EML5Q05BV3 1969 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 VPS13AQ96RL7 3174 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 WDR87Q6ZQQ6 2873 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 F5H423 210 aaPredicted RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 H7C0C1 242 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 AGRPO00253 132 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 KRIT1O00522 736 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 RGS13O14921 159 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 TMPRSS2O15393 492 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 SMAD6O43541 496 aaKnown RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 KDELR3O43731 214 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 CEP104O60308 925 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 ZMPSTE24O75844 475 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 TJP3O95049 919 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 IGSF6O95976 241 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 HNRNPLP14866 589 aaKnown RBP eCLIP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 AVPR2P30518 371 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 NTF4P34130 210 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 PTPN7P35236 360 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 GARSP41250 739 aaKnown RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 ATP5OP48047 213 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 CXCL12P48061 93 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 PEX5P50542 639 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 CCNHP51946 323 aaPredicted RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 DGKEP52429 567 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 OTUD4Q01804 1114 aaKnown RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 CSTF1Q05048 431 aaKnown RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 IL10RBQ08334 325 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 ADCY2Q08462 1091 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 DMWDQ09019 674 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 AP1B1Q10567 949 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 FZD5Q13467 585 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 PDK1Q15118 436 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 ANGPT1Q15389 498 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 DLG2Q15700 870 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 CRY1Q16526 586 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 HNRNPA1L2Q32P51 320 aaKnown RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 RNFT1Q5M7Z0 435 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 ZNF776Q68DI1 518 aaPredicted RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 SLC6A19Q695T7 634 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 SLC9A4Q6AI14 798 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 TIGD7Q6NT04 549 aaPredicted RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 BBS12Q6ZW61 710 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 DSG4Q86SJ6 1040 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 ZC3H18Q86VM9 953 aaKnown RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 HID1Q8IV36 788 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 CDKL3Q8IVW4 592 aaPredicted RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 C1orf210Q8IVY1 113 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 MRPL41Q8IXM3 137 aaKnown RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 PHACTR4Q8IZ21 702 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 STK40Q8N2I9 435 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 BBS5Q8N3I7 341 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 PCDH20Q8N6Y1 951 aaKnown RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 MDGA1Q8NFP4 955 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 GANCQ8TET4 914 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 CHAC2Q8WUX2 184 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 ATG4AQ8WYN0 398 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 OR8D1Q8WZ84 308 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 P3H4Q92791 437 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 GDAP1L1Q96MZ0 367 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 QKIQ96PU8 341 aaKnown RBP eCLIP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 WDR24Q96S15 920 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 LGMNQ99538 433 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 NAPGQ99747 312 aaPredicted RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 DHRS4Q9BTZ2 278 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 TLR10Q9BXR5 811 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 ACE2Q9BYF1 805 aaPredicted RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 CARD9Q9H257 536 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 TMEM245Q9H330 911 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 PDFQ9HBH1 243 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 RAD18Q9NS91 495 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 FAM86C1Q9NVL1 165 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 KCNK4Q9NYG8 393 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 SAE1Q9UBE0 346 aaPredicted RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 SUCOQ9UBS9 1254 aaKnown RBP6.49□□□□□ -1.37
VPS4B-205ENST00000591383 ZKSCAN5Q9Y2L8 839 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 ATP8A1Q9Y2Q0 1164 aa6.49□□□□□ -1.37
VPS4B-205ENST00000591383 PLXND1Q9Y4D7 1925 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 A0A1W2PQF6 199 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 TCRBV7S2A1N4TA0A589 114 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 CTAGE9A4FU28 777 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 ANKRD34BA5PLL1 514 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 C1QTNF3-AMACRE9PGA6 284 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 APOC4-APOC2K7ER74 178 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 KCNK1O00180 336 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 RNF103O00237 685 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 KPNA3O00505 521 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms