RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 DPP9Q86TI2 863 aa12.44□□□□□ -0.42
PDE4A-207ENST00000590407 FAM156AQ8NDB6 213 aa12.44□□□□□ -0.42
PDE4A-207ENST00000590407 DIS3LQ8TF46 1054 aaKnown RBP12.44□□□□□ -0.42
PDE4A-207ENST00000590407 TSPEARQ8WU66 669 aa12.44□□□□□ -0.42
PDE4A-207ENST00000590407 ZC3H15Q8WU90 426 aaKnown RBP12.44□□□□□ -0.42
PDE4A-207ENST00000590407 GAB3Q8WWW8 586 aa12.44□□□□□ -0.42
PDE4A-207ENST00000590407 TCF12Q99081 682 aa12.44□□□□□ -0.42
PDE4A-207ENST00000590407 OLFM1Q99784 485 aa12.44□□□□□ -0.42
PDE4A-207ENST00000590407 SLC39A8Q9C0K1 460 aa12.44□□□□□ -0.42
PDE4A-207ENST00000590407 PCDHAC1Q9H158 963 aa12.44□□□□□ -0.42
PDE4A-207ENST00000590407 MUC13Q9H3R2 512 aa12.44□□□□□ -0.42
PDE4A-207ENST00000590407 SMOC2Q9H3U7 446 aa12.44□□□□□ -0.42
PDE4A-207ENST00000590407 CCM2LQ9NUG4 571 aaPredicted RBP12.44□□□□□ -0.42
PDE4A-207ENST00000590407 DUS2Q9NX74 493 aaKnown RBP12.44□□□□□ -0.42
PDE4A-207ENST00000590407 NDUFAF1Q9Y375 327 aa12.44□□□□□ -0.42
PDE4A-207ENST00000590407 CCDC78A2IDD5 438 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 CCDC160A6NGH7 325 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 DDNO94850 711 aaPredicted RBP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 CYP11A1P05108 521 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 GPX3P22352 226 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 WNT3AP56704 352 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 STX1BP61266 288 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 ATP6V0D1P61421 351 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 FOXM1Q08050 763 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 DCTN2Q13561 401 aaKnown RBP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 UGT3A2Q3SY77 523 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 MTX3Q5HYI7 312 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 RBM20Q5T481 1227 aaKnown RBP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 RWDD4Q6NW29 188 aaKnown RBP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 GPR142Q7Z601 462 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 DHFR2Q86XF0 187 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 MINDY1Q8N5J2 469 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 RTL3Q8N8U3 475 aaKnown RBP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 RNF217Q8TC41 542 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 TFAP2CQ92754 450 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 RNF34Q969K3 372 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 MYLPFQ96A32 169 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 RMND5BQ96G75 393 aaPredicted RBP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 SLC45A3Q96JT2 553 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 PKMYT1Q99640 499 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 ACBD6Q9BR61 282 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 MFSD1Q9H3U5 465 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 CLK4Q9HAZ1 481 aaKnown RBP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 TNFRSF12AQ9NP84 129 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 CHST12Q9NRB3 414 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 RBM22Q9NW64 420 aaKnown RBP eCLIP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 PATJQ8NI35 1801 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 H3BSA7 217 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 HNRNPRO43390 633 aaKnown RBP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 MATN4O95460 622 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 CCR1P32246 355 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 SERPINH1P50454 418 aaKnown RBP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 ZNF678Q5SXM1 525 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 HECTD2Q5U5R9 776 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 TWF2Q6IBS0 349 aaKnown RBP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 LCN8Q6JVE9 175 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 KRT80Q6KB66 452 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 ZBTB49Q6ZSB9 765 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 CILP2Q8IUL8 1156 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 FUNDC1Q8IVP5 155 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 CLYBLQ8N0X4 340 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 SPATA6LQ8N4H0 392 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 TRIML2Q8N7C3 387 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 TNIP2Q8NFZ5 429 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 PEX13Q92968 403 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 SGF29Q96ES7 293 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 IMP4Q96G21 291 aaKnown RBP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 SLC29A1Q99808 456 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 RTP3Q9BQQ7 232 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 TMEM79Q9BSE2 394 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 POPDC3Q9HBV1 291 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 CCDC167Q9P0B6 97 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 RGS17Q9UGC6 210 aaPredicted RBP12.43□□□□□ -0.42
PDE4A-207ENST00000590407 VWA7Q9Y334 891 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 SNX13Q9Y5W8 968 aa12.43□□□□□ -0.42
PDE4A-207ENST00000590407 A0A087WXM4 84 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 MROH6A6NGR9 719 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 PDHXO00330 501 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 DYNC1LI2O43237 492 aaPredicted RBP12.42□□□□□ -0.42
PDE4A-207ENST00000590407 TREHO43280 583 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 PMPCBO75439 489 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 PAGE1O75459 146 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 TRPA1O75762 1119 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 THP07101 528 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 ODC1P11926 461 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 MYF6P23409 242 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 PCSK6P29122 969 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 SUOXP51687 545 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 RABGGTBP53611 331 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 EMP3P54852 163 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 HERVK_113P63132 956 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 PRKCQQ04759 706 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 NRF1Q16656 503 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 PPP1R3AQ16821 1122 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 TBC1D25Q3MII6 688 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 FIBCD1Q8N539 461 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 TADA1Q96BN2 335 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 C19orf60Q96EN9 201 aa12.42□□□□□ -0.42
PDE4A-207ENST00000590407 FEM1CQ96JP0 617 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms