RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 CPP00450 1065 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 JCHAINP01591 159 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 XPAP23025 273 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-212ENST00000590260 PEX5P50542 639 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 IFI35P80217 286 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-212ENST00000590260 SHC2P98077 582 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 FOXC1Q12948 553 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 PDE1CQ14123 709 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-212ENST00000590260 SUZ12Q15022 739 aaKnown RBP18.31■□□□□ 0.52
DDX39A-212ENST00000590260 CNGA3Q16281 694 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 ERAP2Q6P179 960 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 DAAM2Q86T65 1068 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 TSPAN33Q86UF1 283 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 OXR1Q8N573 874 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 EID2Q8N6I1 236 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 CCNYQ8ND76 341 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 PDCD6IPQ8WUM4 868 aaKnown RBP18.31■□□□□ 0.52
DDX39A-212ENST00000590260 NSMCE1Q8WV22 266 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 MCCC1Q96RQ3 725 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-212ENST00000590260 POLR1EQ9GZS1 481 aaKnown RBP18.31■□□□□ 0.52
DDX39A-212ENST00000590260 PPIL1Q9Y3C6 166 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 RAI2Q9Y5P3 530 aa18.31■□□□□ 0.52
DDX39A-212ENST00000590260 CFAP69A5D8W1 941 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 NPIPB15A6NHN6 443 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-212ENST00000590260 TRIM38O00635 465 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 YKT6O15498 198 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 CST8O60676 142 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 PIAS2O75928 621 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 RECQL5O94762 991 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-212ENST00000590260 ITGAVP06756 1048 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 MX2P20592 715 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 DGKAP23743 735 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 CTNNA1P35221 906 aaKnown RBP18.3■□□□□ 0.52
DDX39A-212ENST00000590260 RABIFP47224 123 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 ARRB1P49407 418 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-212ENST00000590260 PRKD1Q15139 912 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-212ENST00000590260 CFAP58Q5T655 872 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 KAZNQ674X7 775 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 AADACL2Q6P093 401 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 RAB44Q7Z6P3 723 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-212ENST00000590260 BBS5Q8N3I7 341 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 FAM174AQ8TBP5 190 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-212ENST00000590260 ALG3Q92685 438 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 COQ10AQ96MF6 247 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 TCEAL2Q9H3H9 227 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-212ENST00000590260 LUC7LQ9NQ29 371 aaKnown RBP18.3■□□□□ 0.52
DDX39A-212ENST00000590260 AMACRQ9UHK6 382 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 PCDHA3Q9Y5H8 950 aa18.3■□□□□ 0.52
DDX39A-212ENST00000590260 GOLGA8CPA6NN73 597 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 HYAL3O43820 417 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-212ENST00000590260 CSF2P04141 144 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 ALPIP09923 528 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 CTPS1P17812 591 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 POLR2LP62875 67 aaKnown RBP18.29■□□□□ 0.52
DDX39A-212ENST00000590260 SKOR1P84550 965 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 ITKQ08881 620 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 LRRC14Q15048 493 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 TFDP3Q5H9I0 405 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 RFLNAQ6ZTI6 216 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 HSD11B1LQ7Z5J1 315 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 NT5DC3Q86UY8 548 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 DCP2Q8IU60 420 aaKnown RBP18.29■□□□□ 0.52
DDX39A-212ENST00000590260 CHCHD4Q8N4Q1 142 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 EXD1Q8NHP7 514 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 TMEM121BQ9BXQ6 578 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-212ENST00000590260 TDRD1Q9BXT4 1180 aaKnown RBP18.29■□□□□ 0.52
DDX39A-212ENST00000590260 MAK16Q9BXY0 300 aaKnown RBP18.29■□□□□ 0.52
DDX39A-212ENST00000590260 KLK13Q9UKR3 277 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 PHTF1Q9UMS5 762 aa18.29■□□□□ 0.52
DDX39A-212ENST00000590260 ARID1BQ8NFD5 2236 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-212ENST00000590260 TDRD6O60522 2096 aaKnown RBP18.28■□□□□ 0.52
DDX39A-212ENST00000590260 K7ESM1 405 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 HEXIM1O94992 359 aaKnown RBP18.28■□□□□ 0.52
DDX39A-212ENST00000590260 ZRANB2O95218 330 aaKnown RBP eCLIP18.28■□□□□ 0.523e-7■■■■□ 25.7
DDX39A-212ENST00000590260 ELFN1P0C7U0 828 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 NME1P15531 152 aaKnown RBP18.28■□□□□ 0.52
DDX39A-212ENST00000590260 ZFXP17010 805 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-212ENST00000590260 CTNNA2P26232 953 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 VIPR1P32241 457 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 HNF1BP35680 557 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 AP1B1Q10567 949 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 DNAJC3Q13217 504 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 INPP5AQ14642 412 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 RCOR2Q8IZ40 523 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 RBFAQ8N0V3 343 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 TADA1Q96BN2 335 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 HAUS1Q96CS2 278 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 IFT43Q96FT9 208 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 SCRN2Q96FV2 425 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 CDC6Q99741 560 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 SCNM1Q9BWG6 230 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 DNAJC28Q9NX36 388 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 CHKBQ9Y259 395 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 TTLL3Q9Y4R7 772 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 AKAP13Q12802 2813 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 PTPRBP23467 1997 aa18.28■□□□□ 0.52
DDX39A-212ENST00000590260 LY6G6EA0A0G2JKS1 128 aa18.27■□□□□ 0.52
DDX39A-212ENST00000590260 A0A0J9YYE9 177 aa18.27■□□□□ 0.52
DDX39A-212ENST00000590260 TNFSF14O43557 240 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms