RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SCG3Q8WXD2 468 aaKnown RBP18.54■□□□□ 0.56
CCDC43-204ENST00000588687 ECHDC3Q96DC8 303 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 ZNF641Q96N77 438 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-204ENST00000588687 NCAPGQ9BPX3 1015 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 SELENOOQ9BVL4 669 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 UBA2Q9UBT2 640 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-204ENST00000588687 DACH1Q9UI36 760 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 NVLO15381 856 aaKnown RBP18.53■□□□□ 0.56
CCDC43-204ENST00000588687 FGF10O15520 208 aaPredicted RBP18.53■□□□□ 0.56
CCDC43-204ENST00000588687 CREB3O43889 395 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 CALB1P05937 261 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 CTSEP14091 401 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 ITIH1P19827 911 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 ETV5P41161 510 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 OGDHQ02218 1023 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 GRM3Q14832 879 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 RD3Q7Z3Z2 195 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 SPRED1Q7Z699 444 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 SLITRK4Q8IW52 837 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 PELI3Q8N2H9 469 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 OR6C4Q8NGE1 309 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 NSMCE3Q96MG7 304 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 TMEM74Q96NL1 305 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 MCEEQ96PE7 176 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 TUBGCP5Q96RT8 1024 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 STRADBQ9C0K7 418 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 VPS16Q9H269 839 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 CLMPQ9H6B4 373 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 CATSPERBQ9H7T0 1116 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 PISDQ9UG56 409 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 LOXL2Q9Y4K0 774 aa18.53■□□□□ 0.56
CCDC43-204ENST00000588687 CFAP69A5D8W1 941 aa18.52■□□□□ 0.56
CCDC43-204ENST00000588687 TMX2-CTNND1H3BSU7 103 aa18.52■□□□□ 0.56
CCDC43-204ENST00000588687 SLC28A2O43868 658 aa18.52■□□□□ 0.56
CCDC43-204ENST00000588687 LIPCP11150 499 aa18.52■□□□□ 0.56
CCDC43-204ENST00000588687 PNLIPP16233 465 aa18.52■□□□□ 0.56
CCDC43-204ENST00000588687 GLB1P16278 677 aa18.52■□□□□ 0.56
CCDC43-204ENST00000588687 WT1P19544 449 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-204ENST00000588687 XPAP23025 273 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-204ENST00000588687 AIF1P55008 147 aa18.52■□□□□ 0.56
CCDC43-204ENST00000588687 HLTFQ14527 1009 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCDC43-204ENST00000588687 CT47A1Q5JQC4 288 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-204ENST00000588687 ERAP2Q6P179 960 aa18.52■□□□□ 0.56
CCDC43-204ENST00000588687 TSEN2Q8NCE0 465 aaKnown RBP18.52■□□□□ 0.56
CCDC43-204ENST00000588687 CNPY3Q9BT09 278 aa18.52■□□□□ 0.56
CCDC43-204ENST00000588687 MRPL40Q9NQ50 206 aaKnown RBP18.52■□□□□ 0.56
CCDC43-204ENST00000588687 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.52■□□□□ 0.56
CCDC43-204ENST00000588687 FOXJ2Q9P0K8 574 aa18.52■□□□□ 0.56
CCDC43-204ENST00000588687 RNF215Q9Y6U7 377 aa18.52■□□□□ 0.56
CCDC43-204ENST00000588687 SDK2Q58EX2 2172 aa18.52■□□□□ 0.56
CCDC43-204ENST00000588687 PRAMEF33A0A0G2JMD5 474 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 PRAMEF10O60809 474 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 RECQL5O94762 991 aaPredicted RBP18.51■□□□□ 0.55
CCDC43-204ENST00000588687 TRIM23P36406 574 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 STAT1P42224 750 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 CSNK1DP48730 415 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 NDST2P52849 883 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 AFMIDQ63HM1 303 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 DNAJC24Q6P3W2 148 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 SCYL2Q6P3W7 929 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 LIPIQ6XZB0 460 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 DTX1Q86Y01 620 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 JAMLQ86YT9 394 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 ARHGAP12Q8IWW6 846 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 OR56A4Q8NGH8 313 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 ATL2Q8NHH9 583 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 CCL4L1Q8NHW4 92 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 ENOX1Q8TC92 643 aaKnown RBP18.51■□□□□ 0.55
CCDC43-204ENST00000588687 SGF29Q96ES7 293 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 CELF6Q96J87 481 aaKnown RBP18.51■□□□□ 0.55
CCDC43-204ENST00000588687 LGR4Q9BXB1 951 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 NUP62CLQ9H1M0 184 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 STARD5Q9NSY2 213 aa18.51■□□□□ 0.55
CCDC43-204ENST00000588687 C9orf172C9J069 976 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 TRAFD1O14545 582 aaPredicted RBP18.5■□□□□ 0.55
CCDC43-204ENST00000588687 WISP1O95388 367 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 TNFP01375 233 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 ITGB2P05107 769 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 HOXC4P09017 264 aaPredicted RBP18.5■□□□□ 0.55
CCDC43-204ENST00000588687 JMJD7P0C870 316 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 ITGB6P18564 788 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 HTR7P34969 479 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 CA9Q16790 459 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 C14orf28Q4W4Y0 310 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 CYP4V2Q6ZWL3 525 aaPredicted RBP18.5■□□□□ 0.55
CCDC43-204ENST00000588687 DPPA4Q7L190 304 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 C17orf82Q86X59 251 aaPredicted RBP18.5■□□□□ 0.55
CCDC43-204ENST00000588687 NPWQ8N729 165 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 Q8N9G6 341 aaPredicted RBP18.5■□□□□ 0.55
CCDC43-204ENST00000588687 SPOCK2Q92563 424 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 SLC39A8Q9C0K1 460 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 TMEM168Q9H0V1 697 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 GPATCH2LQ9NWQ4 482 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 PCDHGA4Q9Y5G9 962 aa18.5■□□□□ 0.55
CCDC43-204ENST00000588687 TERTO14746 1132 aaKnown RBP18.49■□□□□ 0.55
CCDC43-204ENST00000588687 TNFRSF10CO14798 259 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 NUDT21O43809 227 aaKnown RBP18.49■□□□□ 0.55
CCDC43-204ENST00000588687 SERPINA4P29622 427 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 PAPOLAP51003 745 aaKnown RBP18.49■□□□□ 0.55
CCDC43-204ENST00000588687 TPI1P60174 286 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms