RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 TM7SF2O76062 418 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 SYPP08247 313 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 C6P13671 934 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 NFKB1P19838 968 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 AKT2P31751 481 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 LIG3P49916 1009 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 LIMK1P53667 647 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 SGCGQ13326 291 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 KIF19Q2TAC6 998 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 STPG1Q5TH74 334 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 DARS2Q6PI48 645 aaKnown RBP20.3■□□□□ 0.84
DDX39A-207ENST00000588542 LIPIQ6XZB0 460 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 GCNT7Q6ZNI0 430 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 CDKL3Q8IVW4 592 aaPredicted RBP20.3■□□□□ 0.84
DDX39A-207ENST00000588542 MFSD2AQ8NA29 543 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 OR2I1PQ8NGU4 316 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 SPATA22Q8NHS9 363 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 SLC35B2Q8TB61 432 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 SCRN2Q96FV2 425 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 SMIM14Q96QK8 99 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 MCCC1Q96RQ3 725 aaPredicted RBP20.3■□□□□ 0.84
DDX39A-207ENST00000588542 ZDHHC5Q9C0B5 715 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 PCDH9Q9HC56 1237 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 TMEM9BQ9NQ34 198 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 SNX11Q9Y5W9 270 aa20.3■□□□□ 0.84
DDX39A-207ENST00000588542 CFAP69A5D8W1 941 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 A8MX80 341 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 ENC1O14682 589 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 MT-CYBP00156 380 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-207ENST00000588542 CTPS1P17812 591 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 GM2AP17900 193 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 CTSKP43235 329 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 CLDN2P57739 230 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 STAT4Q14765 748 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 SLC14A2Q15849 920 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 ZNF569Q5MCW4 686 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 PID1Q7Z2X4 250 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 ADAT2Q7Z6V5 191 aaKnown RBP20.29■□□□□ 0.84
DDX39A-207ENST00000588542 ABI3BPQ7Z7G0 1075 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 IQCHQ86VS3 1027 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 SLC35F6Q8N357 371 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 NETO1Q8TDF5 533 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 CENPTQ96BT3 561 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 BMFQ96LC9 184 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 TRIB3Q96RU7 358 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 GTPBP2Q9BX10 602 aaKnown RBP20.29■□□□□ 0.84
DDX39A-207ENST00000588542 KLHL8Q9P2G9 620 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-207ENST00000588542 TRHDEQ9UKU6 1024 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 JRKLQ9Y4A0 524 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 HS3ST3A1Q9Y663 406 aa20.29■□□□□ 0.84
DDX39A-207ENST00000588542 A0A0J9YYE9 177 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 POM121BA6NF01 834 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 NPIPB15A6NHN6 443 aaPredicted RBP20.28■□□□□ 0.84
DDX39A-207ENST00000588542 C4orf47A7E2U8 309 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 TLR4O00206 839 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 KCNN4O15554 427 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 TRBC1P01850 177 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 ALPIP09923 528 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 CA4P22748 312 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 LHCGRP22888 699 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 VIPR1P32241 457 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 HNF1BP35680 557 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 AGERQ15109 404 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 SIX1Q15475 284 aaPredicted RBP20.28■□□□□ 0.84
DDX39A-207ENST00000588542 CNGA3Q16281 694 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 CBARPQ8N350 705 aaPredicted RBP20.28■□□□□ 0.84
DDX39A-207ENST00000588542 MINDY1Q8N5J2 469 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 TP53I13Q8NBR0 393 aaPredicted RBP20.28■□□□□ 0.84
DDX39A-207ENST00000588542 DENND6BQ8NEG7 585 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 FCRL5Q96RD9 977 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 DNPEPQ9ULA0 475 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 CABIN1Q9Y6J0 2220 aa20.28■□□□□ 0.84
DDX39A-207ENST00000588542 TDRD6O60522 2096 aaKnown RBP20.27■□□□□ 0.84
DDX39A-207ENST00000588542 A0A0U1RQS6 177 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 HEXIM1O94992 359 aaKnown RBP20.27■□□□□ 0.84
DDX39A-207ENST00000588542 ELFN1P0C7U0 828 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 CXCR5P32302 372 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 C21orf59P57076 290 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 NXPH1P58417 271 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 RPL26P61254 145 aaKnown RBP20.27■□□□□ 0.84
DDX39A-207ENST00000588542 OVGP1Q12889 678 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 RSPO4Q2I0M5 234 aaPredicted RBP20.27■□□□□ 0.84
DDX39A-207ENST00000588542 HLA-BQ31612 363 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 KDELC1Q6UW63 502 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 KDM7AQ6ZMT4 941 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 USP45Q70EL2 814 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 TSPAN33Q86UF1 283 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 SPATS2Q86XZ4 545 aaKnown RBP20.27■□□□□ 0.84
DDX39A-207ENST00000588542 LPCAT1Q8NF37 534 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 OR13H1Q8NG92 308 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 ATG4AQ8WYN0 398 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 OXNAD1Q96HP4 312 aaPredicted RBP20.27■□□□□ 0.84
DDX39A-207ENST00000588542 GORASP1Q9BQQ3 440 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 IL21RQ9HBE5 538 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 MBNL1Q9NR56 388 aaKnown RBP20.27■□□□□ 0.84
DDX39A-207ENST00000588542 DNAAF2Q9NVR5 837 aaKnown RBP20.27■□□□□ 0.84
DDX39A-207ENST00000588542 UBP1Q9NZI7 540 aa20.27■□□□□ 0.84
DDX39A-207ENST00000588542 RPL26L1Q9UNX3 145 aaKnown RBP20.27■□□□□ 0.84
DDX39A-207ENST00000588542 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.27■□□□□ 0.84
DDX39A-207ENST00000588542 ANKRD66B4E2M5 251 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms