RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 PHTF1Q9UMS5 762 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 PCDHGC4Q9Y5F7 938 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 ALG6Q9Y672 507 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 EPN1Q9Y6I3 576 aaPredicted RBP10.55□□□□□ -0.72
TPM4-209ENST00000588483 CSNK1G3Q9Y6M4 447 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 SOWAHDA6NJG2 315 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 H3BM21 787 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 ENC1O14682 589 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 APOL1O14791 398 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 SCAMP1O15126 338 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 SPOPO43791 374 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 LDOC1O95751 146 aaPredicted RBP10.54□□□□□ -0.72
TPM4-209ENST00000588483 CPP00450 1065 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 HOXC4P09017 264 aaPredicted RBP10.54□□□□□ -0.72
TPM4-209ENST00000588483 ELFN1P0C7U0 828 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 CCNB1P14635 433 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 ACP1P24666 158 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 TRIM23P36406 574 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 CDKN2BP42772 138 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 NR2C2P49116 596 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 ACADVLP49748 655 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 MAXP61244 160 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 EIF2B5Q13144 721 aaKnown RBP10.54□□□□□ -0.72
TPM4-209ENST00000588483 PDE1CQ14123 709 aaPredicted RBP10.54□□□□□ -0.72
TPM4-209ENST00000588483 IRF4Q15306 451 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 SMAD1Q15797 465 aaKnown RBP10.54□□□□□ -0.72
TPM4-209ENST00000588483 ARMC12Q5T9G4 340 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 ESRP1Q6NXG1 681 aaKnown RBP10.54□□□□□ -0.72
TPM4-209ENST00000588483 TMPRSS7Q7RTY8 843 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 CCDC13Q8IYE1 715 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 KATNAL2Q8IYT4 538 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 CHCHD4Q8N4Q1 142 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 EID2Q8N6I1 236 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 FAM181AQ8N9Y4 354 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 ZNF548Q8NEK5 533 aaPredicted RBP10.54□□□□□ -0.72
TPM4-209ENST00000588483 ARRDC2Q8TBH0 407 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 BTN2A2Q8WVV5 523 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 PIH1D2Q8WWB5 315 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 SCRN2Q96FV2 425 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 CNDP2Q96KP4 475 aaKnown RBP10.54□□□□□ -0.72
TPM4-209ENST00000588483 COQ10AQ96MF6 247 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 ZNF830Q96NB3 372 aaPredicted RBP10.54□□□□□ -0.72
TPM4-209ENST00000588483 IL12RB2Q99665 862 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 NT5MQ9NPB1 228 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 B4GALT6Q9UBX8 382 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 KLF15Q9UIH9 416 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 KLK13Q9UKR3 277 aa10.54□□□□□ -0.72
TPM4-209ENST00000588483 REXO2Q9Y3B8 237 aaKnown RBP10.54□□□□□ -0.72
TPM4-209ENST00000588483 CACNA1BQ00975 2339 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 TTC24A2A3L6 582 aaPredicted RBP10.53□□□□□ -0.72
TPM4-209ENST00000588483 RCCD1A6NED2 376 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 NEMP2A6NFY4 417 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 TRIM38O00635 465 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 TPP1O14773 563 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 PJA2O43164 708 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 SDC3O75056 442 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 RECQL5O94762 991 aaPredicted RBP10.53□□□□□ -0.72
TPM4-209ENST00000588483 HEXIM1O94992 359 aaKnown RBP10.53□□□□□ -0.72
TPM4-209ENST00000588483 KRT1P04264 644 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 PRKCGP05129 697 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 HLA-DQB2P05538 268 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 CKMT2P17540 419 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 LHCGRP22888 699 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 TEAD1P28347 426 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 VIPR1P32241 457 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 KIAA1024LP59773 190 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 RPL26P61254 145 aaKnown RBP10.53□□□□□ -0.72
TPM4-209ENST00000588483 IHHQ14623 411 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 PDK1Q15118 436 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 SLC14A2Q15849 920 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 CNGA3Q16281 694 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 MFSD7Q6UXD7 560 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 RAD9BQ6WBX8 426 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 CCNI2Q6ZMN8 369 aaPredicted RBP10.53□□□□□ -0.72
TPM4-209ENST00000588483 CACTIN-AS1Q8N1I8 211 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 TPCN2Q8NHX9 752 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.53□□□□□ -0.72
TPM4-209ENST00000588483 LYSMD1Q96S90 227 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 LGMNQ99538 433 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 SEMA3CQ99985 751 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 DUSP23Q9BVJ7 150 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 TDRD1Q9BXT4 1180 aaKnown RBP10.53□□□□□ -0.72
TPM4-209ENST00000588483 USP29Q9HBJ7 922 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 RBM22Q9NW64 420 aaKnown RBP eCLIP10.53□□□□□ -0.72
TPM4-209ENST00000588483 UCKL1Q9NWZ5 548 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 DNAJC28Q9NX36 388 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 SALL4Q9UJQ4 1053 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 PNMA8BQ9ULN7 279 aaPredicted RBP10.53□□□□□ -0.72
TPM4-209ENST00000588483 RPL26L1Q9UNX3 145 aaKnown RBP10.53□□□□□ -0.72
TPM4-209ENST00000588483 COQ6Q9Y2Z9 468 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 RAI2Q9Y5P3 530 aa10.53□□□□□ -0.72
TPM4-209ENST00000588483 LY6G6EA0A0G2JKS1 128 aa10.52□□□□□ -0.73
TPM4-209ENST00000588483 A0A0J9YYE9 177 aa10.52□□□□□ -0.73
TPM4-209ENST00000588483 TMEM8BA6NDV4 472 aa10.52□□□□□ -0.73
TPM4-209ENST00000588483 NPIPB15A6NHN6 443 aaPredicted RBP10.52□□□□□ -0.73
TPM4-209ENST00000588483 PPP1R12AO14974 1030 aaPredicted RBP10.52□□□□□ -0.73
TPM4-209ENST00000588483 SIGLEC6O43699 453 aa10.52□□□□□ -0.73
TPM4-209ENST00000588483 LZTS3O60299 673 aaPredicted RBP10.52□□□□□ -0.73
TPM4-209ENST00000588483 RFPL3O75679 317 aa10.52□□□□□ -0.73
TPM4-209ENST00000588483 IPO7O95373 1038 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms