RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 SUN2Q9UH99 717 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 SARDHQ9UL12 918 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 CA14Q9ULX7 337 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 PHTF1Q9UMS5 762 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 RPL26L1Q9UNX3 145 aaKnown RBP11.36□□□□□ -0.59
VMP1-207ENST00000588131 ARL5AQ9Y689 179 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 CUL9Q8IWT3 2517 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 A0A0J9YYE9 177 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 MROH6A6NGR9 719 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 CXorf49A8MYA2 514 aaPredicted RBP11.35□□□□□ -0.59
VMP1-207ENST00000588131 SPAG6O75602 509 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 ALDH1A2O94788 518 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 TRBC1P01850 177 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 SLC4A1P02730 911 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 POLBP06746 335 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 GCAP28676 217 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 STX2P32856 288 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 HNF1BP35680 557 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 SEMG2Q02383 582 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 IFFO1Q0D2I5 559 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 ELAVL3Q14576 367 aaKnown RBP11.35□□□□□ -0.59
VMP1-207ENST00000588131 LONRF1Q17RB8 773 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 LRRC73Q5JTD7 316 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 CEP85LQ5SZL2 805 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 GLT6D1Q7Z4J2 308 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 TTC30BQ8N4P2 665 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 IL17RCQ8NAC3 791 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.35□□□□□ -0.59
VMP1-207ENST00000588131 PIP4K2CQ8TBX8 421 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 BRSK1Q8TDC3 778 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 EPS8L3Q8TE67 593 aaKnown RBP11.35□□□□□ -0.59
VMP1-207ENST00000588131 ARRDC3Q96B67 414 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 LRIG1Q96JA1 1093 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 GABRG3Q99928 467 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 OSBPL1AQ9BXW6 950 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 ACSS3Q9H6R3 686 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 MOCS1Q9NZB8 636 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 SLC17A6Q9P2U8 582 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 PPM1HQ9ULR3 514 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 NDRG2Q9UN36 371 aaKnown RBP11.35□□□□□ -0.59
VMP1-207ENST00000588131 SORCS3Q9UPU3 1222 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 PPIL1Q9Y3C6 166 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 ZNF711Q9Y462 761 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 FAM169AQ9Y6X4 670 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 CKAP5Q14008 2032 aa11.35□□□□□ -0.59
VMP1-207ENST00000588131 EXOC1LA0A1B0GW35 172 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 A0A1W2PQ67 120 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 CAPN8A6NHC0 703 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 NPIPB15A6NHN6 443 aaPredicted RBP11.34□□□□□ -0.59
VMP1-207ENST00000588131 FAM159BA6NKW6 160 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 SMIM23A6NLE4 172 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 A8MX80 341 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 KPNA3O00505 521 aaPredicted RBP11.34□□□□□ -0.59
VMP1-207ENST00000588131 CCL22O00626 93 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 NPC1O15118 1278 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 ADAM23O75077 832 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 RNF40O75150 1001 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 KLF8O95600 359 aaPredicted RBP11.34□□□□□ -0.59
VMP1-207ENST00000588131 PRNPP04156 253 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 ERVK-10P10266 1014 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 TIMP2P16035 220 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 COL9A1P20849 921 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 ARNTP27540 789 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 NTSR1P30989 418 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 SLCO1A2P46721 670 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 ARSDP51689 593 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 ZNF140P52738 457 aaPredicted RBP11.34□□□□□ -0.59
VMP1-207ENST00000588131 MRPS21P82921 87 aaKnown RBP11.34□□□□□ -0.59
VMP1-207ENST00000588131 TMPRSS15P98073 1019 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 CAMK2GQ13555 558 aaPredicted RBP11.34□□□□□ -0.59
VMP1-207ENST00000588131 CCINQ13939 588 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 STAT4Q14765 748 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 TAF1AQ15573 450 aaPredicted RBP11.34□□□□□ -0.59
VMP1-207ENST00000588131 CNGA3Q16281 694 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 CDKN3Q16667 212 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 KBTBD12Q3ZCT8 623 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 ZNF805Q5CZA5 627 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 ARMC3Q5W041 872 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 KIAA1211LQ6NV74 962 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 PARS2Q7L3T8 475 aaKnown RBP11.34□□□□□ -0.59
VMP1-207ENST00000588131 LYSMD3Q7Z3D4 306 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 TSPAN33Q86UF1 283 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 MMAAQ8IVH4 418 aaKnown RBP11.34□□□□□ -0.59
VMP1-207ENST00000588131 TXNDC5Q8NBS9 432 aaKnown RBP11.34□□□□□ -0.59
VMP1-207ENST00000588131 TMIEQ8NEW7 156 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 OR13C4Q8NGS5 318 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 OR13J1Q8NGT2 312 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 SPOCK2Q92563 424 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 EID2BQ96D98 161 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 MRRFQ96E11 262 aaKnown RBP11.34□□□□□ -0.59
VMP1-207ENST00000588131 CERS2Q96G23 380 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 DNAJC1Q96KC8 554 aaKnown RBP11.34□□□□□ -0.59
VMP1-207ENST00000588131 MAGEE1Q9HCI5 957 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 ARHGEF3Q9NR81 526 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 POLR3BQ9NW08 1133 aaPredicted RBP11.34□□□□□ -0.59
VMP1-207ENST00000588131 CTNNAL1Q9UBT7 734 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 SCN8AQ9UQD0 1980 aa11.34□□□□□ -0.59
VMP1-207ENST00000588131 KRBA1A5PL33 1030 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 C16orf96A6NNT2 1141 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 UPK3BL1B0FP48 263 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms