RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 OLIG2Q13516 323 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 DLG2Q15700 870 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 HSP90AA5PQ58FG0 334 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 TJAP1Q5JTD0 557 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 ATXN7L2Q5T6C5 722 aaPredicted RBP6.22□□□□□ -1.41
LIG3-206ENST00000586058 HHATQ5VTY9 493 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 ZDHHC20Q5W0Z9 365 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 TRIM68Q6AZZ1 485 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 ZNF470Q6ECI4 717 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 SDE2Q6IQ49 451 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 ERAP2Q6P179 960 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 BRAT1Q6PJG6 821 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 SERPINA13PQ6UXR4 307 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 PACS1Q6VY07 963 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 KIAA0408Q6ZU52 694 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 RAPH1Q70E73 1250 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 TRMT11Q7Z4G4 463 aaKnown RBP6.22□□□□□ -1.41
LIG3-206ENST00000586058 STRA8Q7Z7C7 330 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 TRABD2AQ86V40 505 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 ANKRD42Q8N9B4 389 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 TERB1Q8NA31 727 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 CCDC63Q8NA47 563 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 KDM1BQ8NB78 822 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 SMRP1Q8NCR6 262 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 GRIN3AQ8TCU5 1115 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 ACMSDQ8TDX5 336 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 SCG3Q8WXD2 468 aaKnown RBP6.22□□□□□ -1.41
LIG3-206ENST00000586058 OR8D1Q8WZ84 308 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 SUSD6Q92537 303 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 NXPE3Q969Y0 559 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 ARL8AQ96BM9 186 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 TLCD1Q96CP7 247 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 MFSD3Q96ES6 412 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 APOPT1Q96IL0 206 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 ZNF641Q96N77 438 aaPredicted RBP6.22□□□□□ -1.41
LIG3-206ENST00000586058 RBBP8Q99708 897 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 HEPHQ9BQS7 1158 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 CPEB1Q9BZB8 566 aaKnown RBP6.22□□□□□ -1.41
LIG3-206ENST00000586058 TNKS2Q9H2K2 1166 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 LINC00597Q9H2U6 94 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 POMKQ9H5K3 350 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 SSU72Q9NP77 194 aaKnown RBP6.22□□□□□ -1.41
LIG3-206ENST00000586058 CHRAC1Q9NRG0 131 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 IARS2Q9NSE4 1012 aaKnown RBP6.22□□□□□ -1.41
LIG3-206ENST00000586058 CATSPERZQ9NTU4 200 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 FAM53CQ9NYF3 392 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 CTNNAL1Q9UBT7 734 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 IL36AQ9UHA7 158 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 EVLQ9UI08 416 aaPredicted RBP6.22□□□□□ -1.41
LIG3-206ENST00000586058 RIMKLBQ9ULI2 386 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 CORO1CQ9ULV4 474 aaPredicted RBP6.22□□□□□ -1.41
LIG3-206ENST00000586058 PHTF1Q9UMS5 762 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 ZNF711Q9Y462 761 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 PCDHB9Q9Y5E1 797 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 PCDHGC4Q9Y5F7 938 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 OR51B4Q9Y5P0 310 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 MTCH2Q9Y6C9 303 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 SLC30A1Q9Y6M5 507 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 PIKFYVEQ9Y2I7 2098 aa6.22□□□□□ -1.41
LIG3-206ENST00000586058 TMEM120BA0PK00 339 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 CAPN8A6NHC0 703 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 MUSKO15146 869 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 PGLSO95336 258 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 PIGNO95427 931 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 MPOP05164 745 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 UGT2B4P06133 528 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 ITGA2BP08514 1039 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 ATXN1LP0C7T5 689 aaKnown RBP6.21□□□□□ -1.42
LIG3-206ENST00000586058 ERVK-10P10266 1014 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 ARSAP15289 507 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 FOSL2P15408 326 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 ZNF30P17039 623 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 KRT4P19013 534 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 POU3F3P20264 500 aaPredicted RBP6.21□□□□□ -1.42
LIG3-206ENST00000586058 ITGALP20701 1170 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 FCARP24071 287 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 TYK2P29597 1187 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 GRIA2P42262 883 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 RGRP47804 291 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 CD151P48509 253 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 POLD2P49005 469 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 TTPAP49638 278 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 RGS19P49795 217 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 CLCN5P51795 746 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 LIMK2P53671 638 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 GNGT1P63211 74 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 PFKPQ01813 784 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 ELP6Q0PNE2 266 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 SFSWAPQ12872 951 aaKnown RBP6.21□□□□□ -1.42
LIG3-206ENST00000586058 TRAF2Q12933 501 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 STARD3Q14849 445 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 GEN1Q17RS7 908 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 CTC1Q2NKJ3 1217 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 MYLK3Q32MK0 819 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 ZRANB3Q5FWF4 1079 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 ARTNQ5T4W7 220 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 TANGO2Q6ICL3 276 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 KLC3Q6P597 504 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 CES3Q6UWW8 571 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 GDPD4Q6W3E5 623 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms