RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 NCKIPSDQ9NZQ3 722 aa18.86■□□□□ 0.61
ATG4D-203ENST00000585752 SPASTQ9UBP0 616 aa18.86■□□□□ 0.61
ATG4D-203ENST00000585752 DOLKQ9UPQ8 538 aa18.86■□□□□ 0.61
ATG4D-203ENST00000585752 ARID1BQ8NFD5 2236 aaPredicted RBP18.86■□□□□ 0.61
ATG4D-203ENST00000585752 CCDC66A2RUB6 948 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 TRIM38O00635 465 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 SCAMP1O15126 338 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 ZRANB2O95218 330 aaKnown RBP eCLIP18.85■□□□□ 0.61
ATG4D-203ENST00000585752 NME1P15531 152 aaKnown RBP18.85■□□□□ 0.61
ATG4D-203ENST00000585752 NFKBIAP25963 317 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 HTR1BP28222 390 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 BCL2L1Q07817 233 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 FZD2Q14332 565 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 LRRC14Q15048 493 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 UGP2Q16851 508 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 TMEM52BQ4KMG9 183 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 VSIG1Q86XK7 387 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 NPWQ8N729 165 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 UBL4BQ8N7F7 174 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 ATL2Q8NHH9 583 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 LMX1AQ8TE12 382 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 KLF6Q99612 283 aaPredicted RBP18.85■□□□□ 0.61
ATG4D-203ENST00000585752 PDFQ9HBH1 243 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 USP29Q9HBJ7 922 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 LZTFL1Q9NQ48 299 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 ETNK2Q9NVF9 386 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 CLCA2Q9UQC9 943 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 USP24Q9UPU5 2620 aa18.85■□□□□ 0.61
ATG4D-203ENST00000585752 GRID2IPA4D2P6 1211 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 ZNF487B1APH4 448 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 APOL1O14791 398 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 AQP9O43315 295 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 NEBLO76041 1014 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 CSNK1DP48730 415 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 SCNN1BP51168 640 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 CCDC173Q0VFZ6 552 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 TARDBPQ13148 414 aaKnown RBP eCLIP18.84■□□□□ 0.61
ATG4D-203ENST00000585752 ZNF235Q14590 738 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 TMCO4Q5TGY1 634 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 KATNAL2Q8IYT4 538 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 RCOR2Q8IZ40 523 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 TSEN2Q8NCE0 465 aaKnown RBP18.84■□□□□ 0.61
ATG4D-203ENST00000585752 ZNF548Q8NEK5 533 aaPredicted RBP18.84■□□□□ 0.61
ATG4D-203ENST00000585752 CENPTQ96BT3 561 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 APOLD1Q96LR9 279 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 RNF157Q96PX1 679 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 SEPT3Q9UH03 358 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 APOBEC3BQ9UH17 382 aaKnown RBP18.84■□□□□ 0.61
ATG4D-203ENST00000585752 PPP2R2CQ9Y2T4 447 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 CSNK1G3Q9Y6M4 447 aa18.84■□□□□ 0.61
ATG4D-203ENST00000585752 ADAMTS20P59510 1910 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 A0A0U1RQJ8 604 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 TAF4O00268 1085 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 RIOK3O14730 519 aaKnown RBP18.83■□□□□ 0.6
ATG4D-203ENST00000585752 CKMT1AP12532 417 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 CTSEP14091 401 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 ITIH2P19823 946 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 MX2P20592 715 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 IL4RP24394 825 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 CTNNA1P35221 906 aaKnown RBP18.83■□□□□ 0.6
ATG4D-203ENST00000585752 BLKP51451 505 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 RWDD2BP57060 319 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 PFN3P60673 137 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 PPARDQ03181 441 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 NSUN2Q08J23 767 aaKnown RBP eCLIP18.83■□□□□ 0.6
ATG4D-203ENST00000585752 TFDP2Q14188 446 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 LBRQ14739 615 aaKnown RBP18.83■□□□□ 0.6
ATG4D-203ENST00000585752 AFMIDQ63HM1 303 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 KAZNQ674X7 775 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 NCBP2-AS2Q69YL0 99 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 ZCCHC8Q6NZY4 707 aaKnown RBP18.83■□□□□ 0.6
ATG4D-203ENST00000585752 CAMK1DQ8IU85 385 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 LRRC49Q8IUZ0 686 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 ARHGAP12Q8IWW6 846 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 PCDH19Q8TAB3 1148 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 FAF2Q96CS3 445 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 PDLIM2Q96JY6 352 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 PCDH12Q9NPG4 1184 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 HAUS2Q9NVX0 235 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 DKK4Q9UBT3 224 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 LHX6Q9UPM6 363 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 COQ6Q9Y2Z9 468 aa18.83■□□□□ 0.6
ATG4D-203ENST00000585752 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.82■□□□□ 0.6
ATG4D-203ENST00000585752 MIF4GDA9UHW6 222 aaKnown RBP18.82■□□□□ 0.6
ATG4D-203ENST00000585752 K7ESM1 405 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 ZSCAN12O43309 604 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 MFSD11O43934 449 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 FTCDO95954 541 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 ANXA6P08133 673 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 CTNNA2P26232 953 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 RPIAP49247 311 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 LIG3P49916 1009 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 CLDN6P56747 220 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 DYNLT1P63172 113 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 PAFAH1B3Q15102 231 aaKnown RBP18.82■□□□□ 0.6
ATG4D-203ENST00000585752 PRRT3Q5FWE3 981 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 TFDP3Q5H9I0 405 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 CCDC181Q5TID7 509 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 MFSD7Q6UXD7 560 aa18.82■□□□□ 0.6
ATG4D-203ENST00000585752 KDM7AQ6ZMT4 941 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms