RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 CXADRP78310 365 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 IL10RBQ08334 325 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 DPYSQ14117 519 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 TMCO4Q5TGY1 634 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 PSTKQ8IV42 348 aaKnown RBP20.55■□□□□ 0.88
TOP3A-219ENST00000584887 ARL10Q8N8L6 244 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 PLA2G15Q8NCC3 412 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 HSPH1Q92598 858 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.55■□□□□ 0.88
TOP3A-219ENST00000584887 THSD1Q9NS62 852 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 SEPT3Q9UH03 358 aa20.55■□□□□ 0.88
TOP3A-219ENST00000584887 RECQL5O94762 991 aaPredicted RBP20.54■□□□□ 0.88
TOP3A-219ENST00000584887 MYBL1P10243 752 aa20.54■□□□□ 0.88
TOP3A-219ENST00000584887 RALGDSQ12967 914 aa20.54■□□□□ 0.88
TOP3A-219ENST00000584887 MTM1Q13496 603 aa20.54■□□□□ 0.88
TOP3A-219ENST00000584887 SPIDRQ14159 915 aa20.54■□□□□ 0.88
TOP3A-219ENST00000584887 ZNF235Q14590 738 aa20.54■□□□□ 0.88
TOP3A-219ENST00000584887 RFTN1Q14699 578 aaPredicted RBP20.54■□□□□ 0.88
TOP3A-219ENST00000584887 LBRQ14739 615 aaKnown RBP20.54■□□□□ 0.88
TOP3A-219ENST00000584887 GPR155Q7Z3F1 870 aa20.54■□□□□ 0.88
TOP3A-219ENST00000584887 GKN2Q86XP6 184 aa20.54■□□□□ 0.88
TOP3A-219ENST00000584887 KCNE4Q8WWG9 221 aa20.54■□□□□ 0.88
TOP3A-219ENST00000584887 PDXPQ96GD0 296 aa20.54■□□□□ 0.88
TOP3A-219ENST00000584887 MRPL47Q9HD33 250 aaKnown RBP20.54■□□□□ 0.88
TOP3A-219ENST00000584887 ENTPD2Q9Y5L3 495 aa20.54■□□□□ 0.88
TOP3A-219ENST00000584887 KIF26BQ2KJY2 2108 aa20.54■□□□□ 0.88
TOP3A-219ENST00000584887 LAMA5O15230 3695 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 TTC24A2A3L6 582 aaPredicted RBP20.53■□□□□ 0.88
TOP3A-219ENST00000584887 CACNB4O00305 520 aaPredicted RBP20.53■□□□□ 0.88
TOP3A-219ENST00000584887 TCEA3O75764 348 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 DXOO77932 396 aaKnown RBP20.53■□□□□ 0.88
TOP3A-219ENST00000584887 AMPD1P23109 780 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 IL1R2P27930 398 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 HCAR3P49019 387 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 RENBPP51606 427 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 ZNF135P52742 658 aaPredicted RBP20.53■□□□□ 0.88
TOP3A-219ENST00000584887 AP1S1P61966 158 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 ACOX1Q15067 660 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 BROXQ5VW32 411 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 KCTD16Q68DU8 428 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 TMCO3Q6UWJ1 677 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 LIPIQ6XZB0 460 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 LZTR1Q8N653 840 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 PDCD6IPQ8WUM4 868 aaKnown RBP20.53■□□□□ 0.88
TOP3A-219ENST00000584887 CCDC74AQ96AQ1 378 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 ECHDC3Q96DC8 303 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 HIC2Q96JB3 615 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 ASCL3Q9NQ33 180 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.53■□□□□ 0.88
TOP3A-219ENST00000584887 MOSPD1Q9UJG1 213 aa20.53■□□□□ 0.88
TOP3A-219ENST00000584887 A0A1W2PNU3 283 aaPredicted RBP20.52■□□□□ 0.88
TOP3A-219ENST00000584887 PMS2P1A4D2B8 440 aa20.52■□□□□ 0.88
TOP3A-219ENST00000584887 TNFP01375 233 aa20.52■□□□□ 0.88
TOP3A-219ENST00000584887 PRB1P04280 392 aa20.52■□□□□ 0.88
TOP3A-219ENST00000584887 TCF4P15884 667 aa20.52■□□□□ 0.88
TOP3A-219ENST00000584887 PCK1P35558 622 aa20.52■□□□□ 0.88
TOP3A-219ENST00000584887 ERVPABLB-1P60509 514 aa20.52■□□□□ 0.88
TOP3A-219ENST00000584887 POLR2LP62875 67 aaKnown RBP20.52■□□□□ 0.88
TOP3A-219ENST00000584887 SLC10A7Q0GE19 358 aa20.52■□□□□ 0.88
TOP3A-219ENST00000584887 LVRNQ6Q4G3 990 aa20.52■□□□□ 0.88
TOP3A-219ENST00000584887 DPPA4Q7L190 304 aa20.52■□□□□ 0.88
TOP3A-219ENST00000584887 WDR48Q8TAF3 677 aa20.52■□□□□ 0.88
TOP3A-219ENST00000584887 OR1E3Q8WZA6 343 aa20.52■□□□□ 0.88
TOP3A-219ENST00000584887 GRAMD1AQ96CP6 724 aa20.52■□□□□ 0.88
TOP3A-219ENST00000584887 SUDS3Q9H7L9 328 aaPredicted RBP20.52■□□□□ 0.88
TOP3A-219ENST00000584887 ETNK2Q9NVF9 386 aa20.52■□□□□ 0.88
TOP3A-219ENST00000584887 KLK10O43240 276 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 KIAA1024LP59773 190 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 NSUN2Q08J23 767 aaKnown RBP eCLIP20.51■□□□□ 0.87
TOP3A-219ENST00000584887 AGERQ15109 404 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 DPYSL2Q16555 572 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 DENND2CQ68D51 928 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 TAF8Q7Z7C8 310 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 SDR16C5Q8N3Y7 309 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 ATPAF2Q8N5M1 289 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 OR56A4Q8NGH8 313 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 SLC39A7Q92504 469 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 FUBP1Q96AE4 644 aaKnown RBP20.51■□□□□ 0.87
TOP3A-219ENST00000584887 NSMCE3Q96MG7 304 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 ZNF599Q96NL3 588 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 PSKH2Q96QS6 385 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 FGF22Q9HCT0 170 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 MRPL40Q9NQ50 206 aaKnown RBP20.51■□□□□ 0.87
TOP3A-219ENST00000584887 WDR70Q9NW82 654 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 B4GALT6Q9UBX8 382 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 PCDHGC4Q9Y5F7 938 aa20.51■□□□□ 0.87
TOP3A-219ENST00000584887 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.5■□□□□ 0.87
TOP3A-219ENST00000584887 CFAP69A5D8W1 941 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 TMEM202A6NGA9 273 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 TRAFD1O14545 582 aaPredicted RBP20.5■□□□□ 0.87
TOP3A-219ENST00000584887 CPP00450 1065 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 SSR1P43307 286 aaKnown RBP20.5■□□□□ 0.87
TOP3A-219ENST00000584887 TPM4P67936 248 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 BOLA3Q53S33 107 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 POLNQ7Z5Q5 900 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 BBS5Q8N3I7 341 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 WDR36Q8NI36 951 aaKnown RBP20.5■□□□□ 0.87
TOP3A-219ENST00000584887 BTBD6Q96KE9 485 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 CSPG4P5Q96PW8 444 aa20.5■□□□□ 0.87
TOP3A-219ENST00000584887 GFM1Q96RP9 751 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms