RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 FUBP1Q96AE4 644 aaKnown RBP18.11■□□□□ 0.49
SRSF1-208ENST00000584773 SMIM14Q96QK8 99 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 NUDCD1Q96RS6 583 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 APOOQ9BUR5 198 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 CLPBQ9H078 707 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 NHEJ1Q9H9Q4 299 aaPredicted RBP18.11■□□□□ 0.49
SRSF1-208ENST00000584773 NT5MQ9NPB1 228 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 RCOR3Q9P2K3 495 aaPredicted RBP18.11■□□□□ 0.49
SRSF1-208ENST00000584773 ANKRD11Q6UB99 2663 aaPredicted RBP18.11■□□□□ 0.49
SRSF1-208ENST00000584773 NEMP2A6NFY4 417 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 HTRA2O43464 458 aaPredicted RBP18.1■□□□□ 0.49
SRSF1-208ENST00000584773 TMEM253P0C7T8 217 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 ELFN1P0C7U0 828 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 MMP13P45452 471 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 ILKQ13418 452 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 PTK2BQ14289 1009 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 IHHQ14623 411 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 CDKN3Q16667 212 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 ALG11Q2TAA5 492 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 FAXCQ5TGI0 409 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 GUSBP11Q6P575 273 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 ENPP7Q6UWV6 458 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 PQLC3Q8N755 202 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 SLC35G2Q8TBE7 412 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 RAPGEF5Q92565 580 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 ZNHIT6Q9NWK9 470 aaKnown RBP18.1■□□□□ 0.49
SRSF1-208ENST00000584773 CHD6Q8TD26 2715 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 RP1P56715 2156 aa18.1■□□□□ 0.49
SRSF1-208ENST00000584773 CPP00450 1065 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 TSHRP16473 764 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 HNF1BP35680 557 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 GARSP41250 739 aaKnown RBP18.09■□□□□ 0.49
SRSF1-208ENST00000584773 PPARDQ03181 441 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 GBE1Q04446 702 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 GALNT2Q10471 571 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 NFATC4Q14934 902 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 PAFAH1B3Q15102 231 aaKnown RBP18.09■□□□□ 0.49
SRSF1-208ENST00000584773 MARC1Q5VT66 337 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 DENND2CQ68D51 928 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 CRTC1Q6UUV9 634 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 RD3Q7Z3Z2 195 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 HID1Q8IV36 788 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 PDCD7Q8N8D1 485 aaKnown RBP18.09■□□□□ 0.49
SRSF1-208ENST00000584773 FAM181AQ8N9Y4 354 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 IFI44Q8TCB0 444 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 PDXPQ96GD0 296 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 ZNF670Q9BS34 389 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 SPASTQ9UBP0 616 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 HYOU1Q9Y4L1 999 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 CSNK1G3Q9Y6M4 447 aa18.09■□□□□ 0.49
SRSF1-208ENST00000584773 COL27A1Q8IZC6 1860 aaPredicted RBP18.09■□□□□ 0.49
SRSF1-208ENST00000584773 DSPP15924 2871 aaKnown RBP18.08■□□□□ 0.49
SRSF1-208ENST00000584773 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.08■□□□□ 0.49
SRSF1-208ENST00000584773 CPED1A4D0V7 1026 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 CTPS1P17812 591 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 LHCGRP22888 699 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 HSPA9P38646 679 aaKnown RBP18.08■□□□□ 0.49
SRSF1-208ENST00000584773 DSC2Q02487 901 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 SLC10A2Q12908 348 aaPredicted RBP18.08■□□□□ 0.49
SRSF1-208ENST00000584773 TBX2Q13207 712 aaPredicted RBP18.08■□□□□ 0.49
SRSF1-208ENST00000584773 ACOX1Q15067 660 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 AGERQ15109 404 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 CNGA3Q16281 694 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 ZFYVE27Q5T4F4 411 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 ZCCHC8Q6NZY4 707 aaKnown RBP18.08■□□□□ 0.49
SRSF1-208ENST00000584773 C19orf48Q6RUI8 117 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 TSPAN33Q86UF1 283 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 TEX26Q8N6G2 289 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 NSMCE1Q8WV22 266 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 BTN2A2Q8WVV5 523 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 RFFLQ8WZ73 363 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 FAF2Q96CS3 445 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 CCDC42Q96M95 316 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 IL12RB2Q99665 862 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 SEMA3CQ99985 751 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 DUSP23Q9BVJ7 150 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 SLC13A1Q9BZW2 595 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 MRPL40Q9NQ50 206 aaKnown RBP18.08■□□□□ 0.49
SRSF1-208ENST00000584773 CLCA2Q9UQC9 943 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 PCDHB1Q9Y5F3 818 aa18.08■□□□□ 0.49
SRSF1-208ENST00000584773 URB1O60287 2271 aaKnown RBP18.07■□□□□ 0.48
SRSF1-208ENST00000584773 TMEM202A6NGA9 273 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 NPIPB15A6NHN6 443 aaPredicted RBP18.07■□□□□ 0.48
SRSF1-208ENST00000584773 YY2O15391 372 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 OPA1O60313 960 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 SOCS5O75159 536 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 MT-CO3P00414 261 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 PDHA1P08559 390 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 TPM1P09493 284 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 ALPIP09923 528 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 CDK4P11802 303 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 MAN1A1P33908 653 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 HK3P52790 923 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 POLR2LP62875 67 aaKnown RBP18.07■□□□□ 0.48
SRSF1-208ENST00000584773 ITKQ08881 620 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 MTM1Q13496 603 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 PDK2Q15119 407 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 TSR1Q2NL82 804 aaKnown RBP18.07■□□□□ 0.48
SRSF1-208ENST00000584773 PERM1Q5SV97 790 aa18.07■□□□□ 0.48
SRSF1-208ENST00000584773 EFL1Q7Z2Z2 1120 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms