RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 CCDC78A2IDD5 438 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.05□□□□□ -0.16
UBBP4-202ENST00000584755 TRIM49D1C9J1S8 452 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 PRPF4O43172 522 aaKnown RBP eCLIP14.05□□□□□ -0.16
UBBP4-202ENST00000584755 GKP32189 559 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 SLC8A1P32418 973 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 ATP1A2P50993 1020 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 ARSDP51689 593 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 SLC18A2Q05940 514 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 RAD51Q06609 339 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 ACCSLQ4AC99 568 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 KIAA0408Q6ZU52 694 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 Q6ZVU0 165 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 GALNT7Q86SF2 657 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 LMNTD2Q8IXW0 634 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 TTC30BQ8N4P2 665 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 PDCD6IPQ8WUM4 868 aaKnown RBP14.05□□□□□ -0.16
UBBP4-202ENST00000584755 MYLIPQ8WY64 445 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 NXPE3Q969Y0 559 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 ISL2Q96A47 359 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 ALKBH8Q96BT7 664 aaKnown RBP14.05□□□□□ -0.16
UBBP4-202ENST00000584755 LYSMD1Q96S90 227 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 SRPK1Q96SB4 655 aaKnown RBP14.05□□□□□ -0.16
UBBP4-202ENST00000584755 FAM167BQ9BTA0 163 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 CIPCQ9C0C6 399 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 SUV39H2Q9H5I1 410 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 IARS2Q9NSE4 1012 aaKnown RBP14.05□□□□□ -0.16
UBBP4-202ENST00000584755 SLC8A2Q9UPR5 921 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 KCTD3Q9Y597 815 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 NUMBLQ9Y6R0 609 aa14.05□□□□□ -0.16
UBBP4-202ENST00000584755 C5orf42Q9H799 3197 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 A0A0J9YYE9 177 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 TMEM120BA0PK00 339 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 GRXCR2A6NFK2 248 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 A6NNZ2 444 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 TTC34A8MYJ7 566 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 AURKAO14965 403 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 TYROBPO43914 113 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 SHOX2O60902 331 aaPredicted RBP14.04□□□□□ -0.16
UBBP4-202ENST00000584755 RFPL1O75677 317 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 RPP40O75818 363 aaKnown RBP14.04□□□□□ -0.16
UBBP4-202ENST00000584755 TRBC1P01850 177 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 MT-ND3P03897 115 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 PIRTP0C851 137 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 SPRP35270 261 aaPredicted RBP14.04□□□□□ -0.16
UBBP4-202ENST00000584755 CCNFP41002 786 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 LIMK2P53671 638 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 PDE1BQ01064 536 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 MPP2Q14168 576 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 ITPRIPL2Q3MIP1 535 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 TUBB8Q3ZCM7 444 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 NEPROQ6NW34 567 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 GLT6D1Q7Z4J2 308 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 STRA8Q7Z7C7 330 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 ZSWIM9Q86XI8 627 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 RYBPQ8N488 228 aaPredicted RBP14.04□□□□□ -0.16
UBBP4-202ENST00000584755 C2CD4AQ8NCU7 369 aaPredicted RBP14.04□□□□□ -0.16
UBBP4-202ENST00000584755 CALML6Q8TD86 181 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 CENPTQ96BT3 561 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 SGSM3Q96HU1 749 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 LRIG1Q96JA1 1093 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 SERAC1Q96JX3 654 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 DNAJC1Q96KC8 554 aaKnown RBP14.04□□□□□ -0.16
UBBP4-202ENST00000584755 SMIM14Q96QK8 99 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 SMC6Q96SB8 1091 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 PSD3Q9NYI0 1048 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 TXNDC16Q9P2K2 825 aa14.04□□□□□ -0.16
UBBP4-202ENST00000584755 SMG5Q9UPR3 1016 aaKnown RBP14.04□□□□□ -0.16
UBBP4-202ENST00000584755 TSPAN11A1L157 253 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 C2orf81A6NN90 581 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 GOLGA8TH3BQL2 631 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 ITGA2BP08514 1039 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 KRT4P19013 534 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 LPOP22079 712 aaPredicted RBP14.03□□□□□ -0.16
UBBP4-202ENST00000584755 MDH1P40925 334 aaKnown RBP14.03□□□□□ -0.16
UBBP4-202ENST00000584755 MAGEA12P43365 314 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 EPHB1P54762 984 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 KDSRQ06136 332 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 THOC5Q13769 683 aaKnown RBP14.03□□□□□ -0.16
UBBP4-202ENST00000584755 BMPR2Q13873 1038 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 CDKN3Q16667 212 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 UGP2Q16851 508 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 PREPLQ4J6C6 727 aaPredicted RBP14.03□□□□□ -0.16
UBBP4-202ENST00000584755 BANPQ8N9N5 519 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 CHST14Q8NCH0 376 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 OR13C4Q8NGS5 318 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 GPR150Q8NGU9 434 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 MDM1Q8TC05 714 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 PTPRN2Q92932 1015 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 HDAC10Q969S8 669 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 CDKN2AIPNLQ96HQ2 116 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 LRCH3Q96II8 777 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 TBATAQ96M53 351 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 MCCC1Q96RQ3 725 aaPredicted RBP14.03□□□□□ -0.16
UBBP4-202ENST00000584755 SELENOSQ9BQE4 189 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 HEPHQ9BQS7 1158 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 RHOJQ9H4E5 214 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 ZDHHC6Q9H6R6 413 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 MKS1Q9NXB0 559 aa14.03□□□□□ -0.16
UBBP4-202ENST00000584755 PHTF1Q9UMS5 762 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms