RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 NETO2Q8NC67 525 aa13.67□□□□□ -0.22
SS18-222ENST00000582792 HCAR2Q8TDS4 363 aa13.67□□□□□ -0.22
SS18-222ENST00000582792 CENPIQ92674 756 aaPredicted RBP13.67□□□□□ -0.22
SS18-222ENST00000582792 IQCDQ96DY2 449 aa13.67□□□□□ -0.22
SS18-222ENST00000582792 WDR92Q96MX6 357 aa13.67□□□□□ -0.22
SS18-222ENST00000582792 NAP1L5Q96NT1 182 aaPredicted RBP13.67□□□□□ -0.22
SS18-222ENST00000582792 STK33Q9BYT3 514 aa13.67□□□□□ -0.22
SS18-222ENST00000582792 KLC2Q9H0B6 622 aa13.67□□□□□ -0.22
SS18-222ENST00000582792 SEPT10Q9P0V9 454 aa13.67□□□□□ -0.22
SS18-222ENST00000582792 OR1A2Q9Y585 309 aa13.67□□□□□ -0.22
SS18-222ENST00000582792 DGKBQ9Y6T7 804 aa13.67□□□□□ -0.22
SS18-222ENST00000582792 UNC13CQ8NB66 2214 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 PRAMEF33A0A0G2JMD5 474 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 TSPAN11A1L157 253 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 F8VZ95 297 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 INSIG1O15503 277 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 PRAMEF10O60809 474 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 PIGNO95427 931 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 CYP1A1P04798 512 aaPredicted RBP13.66□□□□□ -0.22
SS18-222ENST00000582792 FAM87AP0C7U9 286 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 PNLIPP16233 465 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 ETV5P41161 510 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 HDAC4P56524 1084 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 YBEYP58557 167 aaPredicted RBP13.66□□□□□ -0.22
SS18-222ENST00000582792 MTM1Q13496 603 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 UGP2Q16851 508 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 MANEAQ5SRI9 462 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 CERCAMQ5T4B2 595 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 KCTD16Q68DU8 428 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 OGFOD3Q6PK18 319 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 SARM1Q6SZW1 724 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 ATG14Q6ZNE5 492 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 ZNF677Q86XU0 584 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 RTL3Q8N8U3 475 aaKnown RBP13.66□□□□□ -0.22
SS18-222ENST00000582792 Q8N9G6 341 aaPredicted RBP13.66□□□□□ -0.22
SS18-222ENST00000582792 NEK11Q8NG66 645 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 JOSD2Q8TAC2 188 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 FAM172AQ8WUF8 416 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 NTAN1Q96AB6 310 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 HMCESQ96FZ2 354 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 PDXPQ96GD0 296 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 SEMA3CQ99985 751 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 NCAPGQ9BPX3 1015 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 PCDH12Q9NPG4 1184 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 LHX3Q9UBR4 397 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 NOCTQ9UK39 431 aaKnown RBP13.66□□□□□ -0.22
SS18-222ENST00000582792 PCDHGA4Q9Y5G9 962 aa13.66□□□□□ -0.22
SS18-222ENST00000582792 ANKRD36A6QL64 1941 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 SUV39H1O43463 412 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 PCCBP05166 539 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 EPHB2P29323 1055 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 PBX1P40424 430 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 LIG3P49916 1009 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 NFKB2Q00653 900 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 SERINC3Q13530 473 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 GRM3Q14832 879 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 CYTH1Q15438 398 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 TBR1Q16650 682 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 FIGNQ5HY92 759 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 ERAP2Q6P179 960 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 SPRED1Q7Z699 444 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 PHLDB2Q86SQ0 1253 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 VASH2Q86V25 355 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 ZFAND4Q86XD8 727 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 DTX1Q86Y01 620 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 DNAAF5Q86Y56 855 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 SLITRK4Q8IW52 837 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 PYROXD2Q8N2H3 581 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 ZSCAN1Q8NBB4 408 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 RNF214Q8ND24 703 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 SLC20A1Q8WUM9 679 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 OR1E3Q8WZA6 343 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 EXOC2Q96KP1 924 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 CMKLR1Q99788 373 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 SUV39H2Q9H5I1 410 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 FOXJ2Q9P0K8 574 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 MYO6Q9UM54 1294 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 RNF215Q9Y6U7 377 aa13.65□□□□□ -0.22
SS18-222ENST00000582792 C9orf172C9J069 976 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 RASA4BC9J798 803 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 RASA4O43374 803 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 WT1P19544 449 aaPredicted RBP13.64□□□□□ -0.23
SS18-222ENST00000582792 CD82P27701 267 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 MMP12P39900 470 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 MAPK10P53779 464 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 JAM2P57087 298 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 KIAA1024LP59773 190 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 CDR2Q01850 454 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 HLTFQ14527 1009 aaKnown RBP eCLIP13.64□□□□□ -0.23
SS18-222ENST00000582792 PARP15Q460N3 678 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 C14orf28Q4W4Y0 310 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 BRAT1Q6PJG6 821 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 TMPRSS9Q7Z410 1059 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 TAF8Q7Z7C8 310 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 SLFN11Q7Z7L1 901 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 GAS2L3Q86XJ1 694 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 PLA2G15Q8NCC3 412 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 FAM46DQ8NEK8 389 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 OR56A4Q8NGH8 313 aa13.64□□□□□ -0.23
SS18-222ENST00000582792 SLC30A5Q8TAD4 765 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms