RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ZDHHC6Q9H6R6 413 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 DYRK4Q9NR20 520 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 SAE1Q9UBE0 346 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 NCKAP1Q9Y2A7 1128 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 ATP8A1Q9Y2Q0 1164 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 ITPR1Q14643 2758 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 HMGB1P1B2RPK0 211 aaPredicted RBP13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 EIF3HO15372 352 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 FAM153BP0C7A2 387 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 BCKDHBP21953 392 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 CES1P23141 567 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 OXTRP30559 389 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 SLC8A1P32418 973 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 GPS1Q13098 491 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 MYLK3Q32MK0 819 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 FAM153CQ494X1 144 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 ATXN7L2Q5T6C5 722 aaPredicted RBP13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 USP30Q70CQ3 517 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 CENPUQ71F23 418 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 ZC3H18Q86VM9 953 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 CACUL1Q86Y37 369 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 PPIL6Q8IXY8 311 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 ZCCHC9Q8N567 271 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 ARFGAP2Q8N6H7 521 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 TSEN2Q8NCE0 465 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 CHST14Q8NCH0 376 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 PIP4K2CQ8TBX8 421 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 GRIN3AQ8TCU5 1115 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 GANCQ8TET4 914 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 EXOC2Q96KP1 924 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 ZIM3Q96PE6 472 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 TUBGCP5Q96RT8 1024 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 VAT1Q99536 393 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 MGME1Q9BQP7 344 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 CPEB1Q9BZB8 566 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 TPSD1Q9BZJ3 242 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 POLR1EQ9GZS1 481 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 ATP13A3Q9H7F0 1226 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 NT5MQ9NPB1 228 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 RBM22Q9NW64 420 aaKnown RBP eCLIP13.61□□□□□ -0.235e-11■□□□□ 8.5
CSNK1D-220ENST00000581737 USP36Q9P275 1121 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 FAM153AQ9UHL3 310 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 PPM1HQ9ULR3 514 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 PLAAQ9Y263 795 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 SPAG17Q6Q759 2223 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 EML5Q05BV3 1969 aa13.61□□□□□ -0.23
CSNK1D-220ENST00000581737 ANKRD36A6QL64 1941 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 GOLGA6CA6NDK9 693 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 KCNK1O00180 336 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 KPNA3O00505 521 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 MID1O15344 667 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 SLC7A4O43246 635 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 JCHAINP01591 159 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 IGLV3-19P01714 112 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 NUDT17P0C025 328 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 GOLGA6DP0CG33 693 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 SERPINA4P29622 427 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 ATP5DP30049 168 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 VPS41P49754 854 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 CBX1P83916 185 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 ARSIQ5FYB1 569 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 SLC36A4Q6YBV0 504 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 SRLQ86TD4 932 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 CCDC25Q86WR0 208 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 IQCKQ8N0W5 287 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 DEFB124Q8NES8 71 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 FAM76AQ8TAV0 307 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 HTR3CQ8WXA8 447 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 NUDCD1Q96RS6 583 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 IL12RB2Q99665 862 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 OMDQ99983 421 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 TMEM121Q9BTD3 319 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 SLC6A17Q9H1V8 727 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 NEUROG2Q9H2A3 272 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 PPCSQ9HAB8 311 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 SCUBE2Q9NQ36 999 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 ITM2CQ9NQX7 267 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 GOLGA6AQ9NYA3 693 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 SEPT10Q9P0V9 454 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 EVLQ9UI08 416 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 FZD4Q9ULV1 537 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 NEU2Q9Y3R4 380 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 WASF2Q9Y6W5 498 aa13.6□□□□□ -0.23
CSNK1D-220ENST00000581737 SOCS5O75159 536 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 LEFTY1O75610 366 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 CA4P22748 312 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 ITGB7P26010 798 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 P2RY2P41231 377 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 SCNN1BP51168 640 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 TPMTP51580 245 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 ARL4CP56559 192 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 IRX4P78413 519 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 SARNPP82979 210 aaKnown RBP13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 ITKQ08881 620 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 TRADDQ15628 312 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 TRIP13Q15645 432 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 ZNF805Q5CZA5 627 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 CEP85LQ5SZL2 805 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms