RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TRAF2Q12933 501 aa19.59■□□□□ 0.73
SREBF1-220ENST00000581707 INPP5AQ14642 412 aa19.59■□□□□ 0.73
SREBF1-220ENST00000581707 MACC1Q6ZN28 852 aa19.59■□□□□ 0.73
SREBF1-220ENST00000581707 KDF1Q8NAX2 398 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-220ENST00000581707 ZNF548Q8NEK5 533 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-220ENST00000581707 BTN2A2Q8WVV5 523 aa19.59■□□□□ 0.73
SREBF1-220ENST00000581707 FATE1Q969F0 183 aa19.59■□□□□ 0.73
SREBF1-220ENST00000581707 SEMA3CQ99985 751 aa19.59■□□□□ 0.73
SREBF1-220ENST00000581707 MAK16Q9BXY0 300 aaKnown RBP19.59■□□□□ 0.73
SREBF1-220ENST00000581707 RBM22Q9NW64 420 aaKnown RBP eCLIP19.59■□□□□ 0.73
SREBF1-220ENST00000581707 NLGN3Q9NZ94 848 aa19.59■□□□□ 0.73
SREBF1-220ENST00000581707 DTLQ9NZJ0 730 aa19.59■□□□□ 0.73
SREBF1-220ENST00000581707 PHTF1Q9UMS5 762 aa19.59■□□□□ 0.73
SREBF1-220ENST00000581707 HYOU1Q9Y4L1 999 aa19.59■□□□□ 0.73
SREBF1-220ENST00000581707 CSNK1G3Q9Y6M4 447 aa19.59■□□□□ 0.73
SREBF1-220ENST00000581707 C3orf70A6NLC5 250 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-220ENST00000581707 NEBLO76041 1014 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 RECQL5O94762 991 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-220ENST00000581707 LCA5LO95447 670 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 CPP00450 1065 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 TNNT1P13805 278 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 CCNB1P14635 433 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 ACP1P24666 158 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 NFKBIAP25963 317 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 ILKQ13418 452 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 ODF2Q5BJF6 829 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 ARMC12Q5T9G4 340 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 VSIG1Q86XK7 387 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 RHOT1Q8IXI2 618 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 CCNYQ8ND76 341 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-220ENST00000581707 LRRN4Q8WUT4 740 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 ZNF830Q96NB3 372 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-220ENST00000581707 PANX2Q96RD6 677 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 APOOQ9BUR5 198 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 DUSP23Q9BVJ7 150 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 POLR1EQ9GZS1 481 aaKnown RBP19.58■□□□□ 0.72
SREBF1-220ENST00000581707 HAUS2Q9NVX0 235 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 B4GALT6Q9UBX8 382 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 AMACRQ9UHK6 382 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 PCDHA13Q9Y5I0 950 aa19.58■□□□□ 0.72
SREBF1-220ENST00000581707 K7ESM1 405 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 AQP9O43315 295 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 SPOPO43791 374 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 PGLSO95336 258 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 KRT1P04264 644 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 PCCBP05166 539 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 COMTP21964 271 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 CES1P23141 567 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 CYLC1P35663 651 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-220ENST00000581707 HADHBP55084 474 aaKnown RBP19.57■□□□□ 0.72
SREBF1-220ENST00000581707 DAB2P98082 770 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 MTM1Q13496 603 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 SPA17Q15506 151 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 FAXCQ5TGI0 409 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 TMPRSS12Q86WS5 348 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 GAS2L3Q86XJ1 694 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 MARCH9Q86YJ5 346 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 PHACTR4Q8IZ21 702 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 PLD5Q8N7P1 536 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 LMX1AQ8TE12 382 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 HDAC11Q96DB2 347 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 SLC13A1Q9BZW2 595 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 DDX56Q9NY93 547 aaKnown RBP19.57■□□□□ 0.72
SREBF1-220ENST00000581707 SPASTQ9UBP0 616 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 APOBEC3BQ9UH17 382 aaKnown RBP19.57■□□□□ 0.72
SREBF1-220ENST00000581707 PNMA8BQ9ULN7 279 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-220ENST00000581707 OR1A2Q9Y585 309 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 HEY1Q9Y5J3 304 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 RAI2Q9Y5P3 530 aa19.57■□□□□ 0.72
SREBF1-220ENST00000581707 WDFY3Q8IZQ1 3526 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 FAM149AA5PLN7 773 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 HTR1BP28222 390 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 VIPR1P32241 457 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 PPARDQ03181 441 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 ACOX1Q15067 660 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 SLC9A4Q6AI14 798 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 ALG1LQ6GMV1 187 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 ENPP7Q6UWV6 458 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 CCDC13Q8IYE1 715 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 RBFAQ8N0V3 343 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.56■□□□□ 0.72
SREBF1-220ENST00000581707 FAM181AQ8N9Y4 354 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 PLA2G15Q8NCC3 412 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 RNF25Q96BH1 459 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-220ENST00000581707 SCRN2Q96FV2 425 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 LGMNQ99538 433 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 TCEAL2Q9H3H9 227 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-220ENST00000581707 LUC7LQ9NQ29 371 aaKnown RBP19.56■□□□□ 0.72
SREBF1-220ENST00000581707 TTLL3Q9Y4R7 772 aa19.56■□□□□ 0.72
SREBF1-220ENST00000581707 APOL1O14791 398 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 CYP2A6P11509 494 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-220ENST00000581707 CKMT1AP12532 417 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 ZFXP17010 805 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-220ENST00000581707 GM2AP17900 193 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 BLKP51451 505 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 DSC2Q02487 901 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 NFATC4Q14934 902 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 CNGA3Q16281 694 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 PRRT3Q5FWE3 981 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms