RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 CFAP45Q9UL16 551 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 KCTD3Q9Y597 815 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 F8P00451 2351 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 TNRC6AQ8NDV7 1962 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 TRIM49BA6NDI0 452 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 B4E171 279 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 CACNB4O00305 520 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 ZW10O43264 779 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 DDAH2O95865 285 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 ERBB2P04626 1255 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 ELAVL4P26378 380 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 CSF2RBP32927 897 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 TSPAN7P41732 249 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 NDUFA8P51970 172 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 COPB1P53618 953 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 GEMIN4P57678 1058 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 KIAA1024LP59773 190 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 SLC6A3Q01959 620 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 ABHD18Q0P651 414 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 ELP6Q0PNE2 266 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 BIRC2Q13490 618 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 ATL3Q6DD88 541 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 KRBA2Q6ZNG9 492 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 C17orf82Q86X59 251 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 SRRM1Q8IYB3 904 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 ZDHHC1Q8WTX9 485 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 FUBP1Q96AE4 644 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 RTP4Q96DX8 246 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 TEFMQ96QE5 360 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 CTRCQ99895 268 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 INTS2Q9H0H0 1204 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 CYP4F12Q9HCS2 524 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 CASS4Q9NQ75 786 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 NDFIP2Q9NV92 336 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 RRN3Q9NYV6 651 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 DKK3Q9UBP4 350 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 STAP1Q9ULZ2 295 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 MRPS18BQ9Y676 258 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 OTOGQ6ZRI0 2925 aa12.64□□□□□ -0.39
CSNK1D-218ENST00000581655 CXorf51AA0A1B0GTR3 108 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 ECEL1O95672 775 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 CLDN1O95832 211 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 ZSCAN22P10073 491 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 KELP23276 732 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 ETFBP38117 255 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 LIG3P49916 1009 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 RNASE9P60153 205 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 RAD51Q06609 339 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 AGERQ15109 404 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 CRTC2Q53ET0 693 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 ACBD5Q5T8D3 534 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 BMPERQ8N8U9 685 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 NETO2Q8NC67 525 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 C1orf131Q8NDD1 294 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 EHBP1Q8NDI1 1231 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 ZNF397Q8NF99 534 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 PATE1Q8WXA2 126 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 HMCESQ96FZ2 354 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 GDAP1L1Q96MZ0 367 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 TBCBQ99426 244 aa12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 SUDS3Q9H7L9 328 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.63□□□□□ -0.392e-12■■■■■ 34.1
CSNK1D-218ENST00000581655 SETD2Q9BYW2 2564 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-218ENST00000581655 ZNF106Q9H2Y7 1883 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 IGHV1OR21-1A0A087WYE8 117 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 TNFRSF10CO14798 259 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 P4HA2O15460 535 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 STK17BO94768 372 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 TMCC1O94876 653 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 F9P00740 461 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 PDGFAP04085 211 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 FGF1P05230 155 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 CCNB1P14635 433 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 GPR3P46089 330 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 SUOXP51687 545 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 EIF2S3LQ2VIR3 472 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 CCDC40Q4G0X9 1142 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 PTPN20Q4JDL3 420 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 NRROSQ86YC3 692 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 NT5C3BQ969T7 300 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 PGAP3Q96FM1 320 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 TTYH3Q9C0H2 523 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 ZMYND15Q9H091 742 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 ZNF768Q9H5H4 540 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 SYNCQ9H7C4 482 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 UBE2TQ9NPD8 197 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 PCDH12Q9NPG4 1184 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 TLK1Q9UKI8 766 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 HPCAL4Q9UM19 191 aa12.62□□□□□ -0.39
CSNK1D-218ENST00000581655 PRSS38A1L453 326 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 PPM1DO15297 605 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 INSIG1O15503 277 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 RFPL1O75677 317 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 PIGNO95427 931 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 IGSF6O95976 241 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 FURINP09958 794 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 BMP6P22004 513 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 F8A1P23610 371 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 AK4P27144 223 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 STAT5AP42229 794 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms