RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 ACAD10Q6JQN1 1059 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 DCUN1D2Q6PH85 259 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 FOXR1Q6PIV2 292 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 OGFOD3Q6PK18 319 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 CCDC81Q6ZN84 652 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 CLEC17AQ6ZS10 378 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 RBM43Q6ZSC3 357 aaKnown RBP10.67□□□□□ -0.7
RFFL-209ENST00000581265 RAB11FIP2Q7L804 512 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 SRLQ86TD4 932 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 ZSWIM9Q86XI8 627 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 MCOLN2Q8IZK6 566 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 KYQ8NBH2 561 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 GPR156Q8NFN8 814 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 CCDC74AQ96AQ1 378 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 ECHDC3Q96DC8 303 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 PCMTD1Q96MG8 357 aaPredicted RBP10.67□□□□□ -0.7
RFFL-209ENST00000581265 WDR92Q96MX6 357 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 GFM1Q96RP9 751 aaKnown RBP10.67□□□□□ -0.7
RFFL-209ENST00000581265 ERGIC2Q96RQ1 377 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 EIF3CQ99613 913 aaKnown RBP10.67□□□□□ -0.7
RFFL-209ENST00000581265 ARHGAP9Q9BRR9 750 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 SLC39A8Q9C0K1 460 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 LMBRD1Q9NUN5 540 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 SEPT11Q9NVA2 429 aaKnown RBP10.67□□□□□ -0.7
RFFL-209ENST00000581265 SIRPGQ9P1W8 387 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 KLQ9UEF7 1012 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 APPL1Q9UKG1 709 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 ACSL6Q9UKU0 697 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 ATP8A1Q9Y2Q0 1164 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 OR1A2Q9Y585 309 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 ATMQ13315 3056 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 ARHGAP42A6NI28 874 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 D6RAR5 112 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 TNFRSF10CO14798 259 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 EFSO43281 561 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 PALMO75781 387 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 RECQL5O94762 991 aaPredicted RBP10.66□□□□□ -0.7
RFFL-209ENST00000581265 CCDC172P0C7W6 258 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 PNLIPP16233 465 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 DESP17661 470 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 CCKBRP32239 447 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 UGT1A5P35504 534 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 TRIM23P36406 574 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 RGRP47804 291 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 PAPOLAP51003 745 aaKnown RBP10.66□□□□□ -0.7
RFFL-209ENST00000581265 INHBCP55103 352 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 TPI1P60174 286 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 POLR2LP62875 67 aaKnown RBP10.66□□□□□ -0.7
RFFL-209ENST00000581265 OGDHQ02218 1023 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 UBXN1Q04323 297 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 MAMLD1Q13495 774 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 C4orf17Q53FE4 359 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 CFAP58Q5T655 872 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 AFMIDQ63HM1 303 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 KCTD16Q68DU8 428 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 NYAP1Q6ZVC0 841 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 IRF2BP2Q7Z5L9 587 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 B3GNT8Q7Z7M8 397 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 FBXO39Q8N4B4 442 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 TSEN2Q8NCE0 465 aaKnown RBP10.66□□□□□ -0.7
RFFL-209ENST00000581265 ANKRD20A12PQ8NF67 263 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 SPOCK2Q92563 424 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 CELF6Q96J87 481 aaKnown RBP10.66□□□□□ -0.7
RFFL-209ENST00000581265 TMEM74Q96NL1 305 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 CCNL2Q96S94 520 aaPredicted RBP10.66□□□□□ -0.7
RFFL-209ENST00000581265 SYT11Q9BT88 431 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.66□□□□□ -0.7
RFFL-209ENST00000581265 STRADBQ9C0K7 418 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 LRRN3Q9H3W5 708 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 ATP13A3Q9H7F0 1226 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 ATXN7L1Q9ULK2 861 aaPredicted RBP10.66□□□□□ -0.7
RFFL-209ENST00000581265 UNC79Q9P2D8 2635 aa10.66□□□□□ -0.7
RFFL-209ENST00000581265 TMEM202A6NGA9 273 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 CACNB4O00305 520 aaPredicted RBP10.65□□□□□ -0.7
RFFL-209ENST00000581265 TRAFD1O14545 582 aaPredicted RBP10.65□□□□□ -0.7
RFFL-209ENST00000581265 NVLO15381 856 aaKnown RBP10.65□□□□□ -0.7
RFFL-209ENST00000581265 NOBOXO60393 691 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 RPLP0P05388 317 aaKnown RBP10.65□□□□□ -0.7
RFFL-209ENST00000581265 GLB1P16278 677 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 FERP16591 822 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 KELP23276 732 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 SERPINA4P29622 427 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 SLC5A2P31639 672 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 HCAR3P49019 387 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 KIAA1024LP59773 190 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 ZFP36L1Q07352 338 aaKnown RBP10.65□□□□□ -0.7
RFFL-209ENST00000581265 RALGDSQ12967 914 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 RFTN1Q14699 578 aaPredicted RBP10.65□□□□□ -0.7
RFFL-209ENST00000581265 CA9Q16790 459 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 CERCAMQ5T4B2 595 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 ERMARDQ5T6L9 678 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 PLEKHA7Q6IQ23 1121 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 PPP1R2P3Q6NXS1 205 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 LIPIQ6XZB0 460 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 APTXQ7Z2E3 356 aaKnown RBP10.65□□□□□ -0.7
RFFL-209ENST00000581265 ARHGAP12Q8IWW6 846 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 ARFGAP1Q8N6T3 406 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 PLA2G15Q8NCC3 412 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 OR56A4Q8NGH8 313 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 OR1E3Q8WZA6 343 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms