RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 BHLHB9Q6PI77 547 aa14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 IRF2BP2Q7Z5L9 587 aa14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 CUZD1Q86UP6 607 aa14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 SLC9A9Q8IVB4 645 aa14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 INPP4AQ96PE3 977 aaPredicted RBP14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 SPATC1LQ9H0A9 340 aa14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 ASB8Q9H765 288 aa14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 AVILO75366 819 aa14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 C9P02748 559 aa14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 PPIBP23284 216 aaKnown RBP14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 FOXR2Q6PJQ5 311 aa14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 CCDC36Q8IYA8 594 aa14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 RBM4BQ9BQ04 359 aaKnown RBP14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 RBM4Q9BWF3 364 aaKnown RBP14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 REXO2Q9Y3B8 237 aaKnown RBP14.59□□□□□ -0.07
CSNK1D-217ENST00000581241 DPPA5A6NC42 116 aa14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 SAGE2PA6NJ88 616 aa14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 KLF10Q13118 480 aa14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 GALNT3Q14435 633 aa14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 ZNHIT3Q15649 155 aaPredicted RBP14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 FAM171A1Q5VUB5 890 aa14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 APTXQ7Z2E3 356 aaKnown RBP14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 CLNKQ7Z7G1 428 aa14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 PGLYRP2Q96PD5 576 aa14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 TEFMQ96QE5 360 aaKnown RBP14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 AKAP7Q9P0M2 348 aaPredicted RBP14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 PFDN2Q9UHV9 154 aa14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 GNEQ9Y223 722 aaKnown RBP14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 COQ6Q9Y2Z9 468 aa14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 FADS3Q9Y5Q0 445 aa14.58□□□□□ -0.07
CSNK1D-217ENST00000581241 CCNKO75909 580 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 PRKAG1P54619 331 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 HKDC1Q2TB90 917 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 REP15Q6BDI9 236 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 DSELQ8IZU8 1212 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 PJA1Q8NG27 643 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 HTRA1Q92743 480 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 DNAJC19Q96DA6 116 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 RHOBTB2Q9BYZ6 727 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 GPN1Q9HCN4 374 aaPredicted RBP14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 ACP6Q9NPH0 428 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 N6AMT1Q9Y5N5 214 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 RFXANKO14593 260 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 LSM1O15116 133 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 NRP2O60462 931 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 TRMUO75648 421 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 PSMD10O75832 226 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 NR2F1P10589 423 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 SDC2P34741 201 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 CCR4P51679 360 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 PTPN5P54829 565 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 USP4Q13107 963 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 XKR6Q5GH73 641 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 THAP5Q7Z6K1 395 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 GPR180Q86V85 440 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 RAB43Q86YS6 212 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 C7orf26Q96N11 449 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 PANX1Q96RD7 426 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 TMPRSS4Q9NRS4 437 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 GMEB1Q9Y692 573 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 MAP2P11137 1827 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 GOT1P17174 413 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 TLX1P31314 330 aaPredicted RBP14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 ITGA7Q13683 1181 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 SCIMPQ6UWF3 145 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 SPPL2CQ8IUH8 684 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 SLC44A1Q8WWI5 657 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 UROC1Q96N76 676 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 ZYG11BQ9C0D3 744 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 DHRS7Q9Y394 339 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 CELF2O95319 508 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 MPSTP25325 297 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 PBX1P40424 430 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 ABL2P42684 1182 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 SKP1P63208 163 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 ECHDC2Q86YB7 292 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 TRAPPC12Q8WVT3 735 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 ZNF607Q96SK3 696 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 MCUBQ9NWR8 336 aa14.58□□□□□ -0.08
CSNK1D-217ENST00000581241 GSAPA4D1B5 854 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 TULP2O00295 520 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 CABYRO75952 493 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 LYNP07948 512 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 LIN52Q52LA3 116 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 FNDC3BQ53EP0 1204 aaKnown RBP14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 CCDC157Q569K6 752 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 TRIM40Q6P9F5 258 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 RPTNQ6XPR3 784 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 DEF8Q6ZN54 512 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 UTS2BQ765I0 119 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 ADAMTSL2Q86TH1 951 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 DSN1Q9H410 356 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 DHX33Q9H6R0 707 aaKnown RBP14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 RMI1Q9H9A7 625 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 LRRC4CQ9HCJ2 640 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 BPIFA1Q9NP55 256 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 TRPV2Q9Y5S1 764 aa14.57□□□□□ -0.08
CSNK1D-217ENST00000581241 PLK4O00444 970 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms