RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 HEATR9A2RTY3 570 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TBC1D3BA6NDS4 549 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 NPIPB15A6NHN6 443 aaPredicted RBP6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SHISA7A6NL88 538 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GAPDHSO14556 408 aaPredicted RBP6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TPP1O14773 563 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SPINT1O43278 529 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CDH16O75309 829 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SPAG6O75602 509 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 LEFTY1O75610 366 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 RFPL1O75677 317 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 RPP40O75818 363 aaKnown RBP6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 KAT7O95251 611 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CLDN7O95471 211 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 EGFP01133 1207 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GSTA2P09210 222 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 C1SP09871 688 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PYGBP11216 843 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 IL9P15248 144 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FOSL2P15408 326 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TIMP2P16035 220 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 KRT15P19012 456 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 LHCGRP22888 699 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CSNK1DP48730 415 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GALK1P51570 392 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 EPHB1P54762 984 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SNRPD1P62314 119 aaKnown RBP6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PPP2R2AP63151 447 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 IRF9Q00978 393 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SLC20A2Q08357 652 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 NSUN2Q08J23 767 aaKnown RBP eCLIP6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SF3A3Q12874 501 aaKnown RBP eCLIP6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GPS2Q13227 327 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SMAD4Q13485 552 aaKnown RBP6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GRM3Q14832 879 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PON2Q15165 354 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SLC14A2Q15849 920 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CDKN3Q16667 212 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ITPRIPL2Q3MIP1 535 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 C9orf64Q5T6V5 341 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ZNF470Q6ECI4 717 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 KIAA0930Q6ICG6 404 aaPredicted RBP6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 NEPROQ6NW34 567 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CNSTQ6PJW8 725 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CRTC1Q6UUV9 634 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 KDM7AQ6ZMT4 941 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CDHR3Q6ZTQ4 885 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SH2D5Q6ZV89 423 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PARS2Q7L3T8 475 aaKnown RBP6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GLT6D1Q7Z4J2 308 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 LRRC6Q86X45 466 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SLC41A1Q8IVJ1 513 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PIANPQ8IYJ0 282 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 DCLK2Q8N568 766 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 OTUD6BQ8N6M0 293 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PCDH20Q8N6Y1 951 aaKnown RBP6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PAF1Q8N7H5 531 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 OR6P1Q8NGX9 317 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GDAP1Q8TB36 358 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PTPRN2Q92932 1015 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ISG20Q96AZ6 181 aaKnown RBP6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FAM136AQ96C01 138 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PPP1R2P1Q96PQ5 205 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 RANBP9Q96S59 729 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 NDNQ99608 321 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 HEPHQ9BQS7 1158 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CCDC77Q9BR77 488 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MCMBPQ9BTE3 642 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 UNKQ9C0B0 810 aaKnown RBP6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CEP44Q9C0F1 390 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ABCG8Q9H221 673 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SUV39H2Q9H5I1 410 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ATP13A3Q9H7F0 1226 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 KCNK9Q9NPC2 374 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 HEBP1Q9NRV9 189 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PCMTD2Q9NV79 361 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ZFATQ9P243 1243 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SLC17A7Q9P2U7 560 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 B4GALT6Q9UBX8 382 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GRID1Q9ULK0 1009 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CEP290O15078 2479 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GREB1Q4ZG55 1949 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 COL4A3Q01955 1670 aa6.17□□□□□ -1.42
RNU4ATAC-201ENST00000580972 NOTCH4Q99466 2003 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 NYNRINQ9P2P1 1898 aaKnown RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 A0A0J9YYE9 177 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CAPN8A6NHC0 703 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ANKRD66B4E2M5 251 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SPECC1L-ADORA2AF8WAN1 911 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 K7EQS6 105 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PHGDHO43175 533 aaKnown RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 DNAJC6O75061 913 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 HAUS5O94927 633 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 POP4O95707 220 aaKnown RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 EPOP01588 193 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TRBC1P01850 177 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 AHSGP02765 367 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MT-ND3P03897 115 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ALDOAP04075 364 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms