RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 LOXL2Q9Y4K0 774 aa10.35□□□□□ -0.75
GGA3-210ENST00000580799 PCDHB11Q9Y5F2 797 aa10.35□□□□□ -0.75
GGA3-210ENST00000580799 A0A1W2PQC6 194 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 EIF3CLB5ME19 914 aaKnown RBP10.34□□□□□ -0.75
GGA3-210ENST00000580799 PDE2AO00408 941 aaPredicted RBP10.34□□□□□ -0.75
GGA3-210ENST00000580799 NUDT21O43809 227 aaKnown RBP10.34□□□□□ -0.75
GGA3-210ENST00000580799 CREB3O43889 395 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 PCCBP05166 539 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 TPM2P07951 284 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 HGFP14210 728 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 DESP17661 470 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 CD82P27701 267 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 STAT1P42224 750 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 NDST2P52849 883 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 POLR2FP61218 127 aaKnown RBP10.34□□□□□ -0.75
GGA3-210ENST00000580799 POLR2LP62875 67 aaKnown RBP10.34□□□□□ -0.75
GGA3-210ENST00000580799 ZFP36L1Q07352 338 aaKnown RBP10.34□□□□□ -0.75
GGA3-210ENST00000580799 NFATC3Q12968 1075 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 ARHGEF7Q14155 803 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 SYCP1Q15431 976 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 TCEA2Q15560 299 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 TGIF1Q15583 401 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 CLEC16AQ2KHT3 1053 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 TSR1Q2NL82 804 aaKnown RBP10.34□□□□□ -0.75
GGA3-210ENST00000580799 C14orf28Q4W4Y0 310 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 FKBP15Q5T1M5 1219 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 SCYL2Q6P3W7 929 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 SPRED1Q7Z699 444 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 TAF8Q7Z7C8 310 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 EXD3Q8N9H8 876 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 FAM46DQ8NEK8 389 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 OR1E3Q8WZA6 343 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 EIF3CQ99613 913 aaKnown RBP10.34□□□□□ -0.75
GGA3-210ENST00000580799 SEMA3CQ99985 751 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 CNPY3Q9BT09 278 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 LRRC19Q9H756 370 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 PDFQ9HBH1 243 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 FAM207AQ9NSI2 230 aaPredicted RBP10.34□□□□□ -0.75
GGA3-210ENST00000580799 STARD5Q9NSY2 213 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 LRIT1Q9P2V4 623 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 FZD10Q9ULW2 581 aa10.34□□□□□ -0.75
GGA3-210ENST00000580799 UBR5O95071 2799 aaPredicted RBP10.34□□□□□ -0.75
GGA3-210ENST00000580799 PRAMEF33A0A0G2JMD5 474 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 TMEM202A6NGA9 273 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.33□□□□□ -0.76
GGA3-210ENST00000580799 ARHGAP6O43182 974 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 ZW10O43264 779 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 CCP110O43303 1012 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 PRAMEF10O60809 474 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 PRAMEF11O60813 436 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 RECQL5O94762 991 aaPredicted RBP10.33□□□□□ -0.76
GGA3-210ENST00000580799 ELFN1P0C7U0 828 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 TRIM23P36406 574 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 TPI1P60174 286 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 HLTFQ14527 1009 aaKnown RBP eCLIP10.33□□□□□ -0.76
GGA3-210ENST00000580799 CLPPQ16740 277 aaPredicted RBP10.33□□□□□ -0.76
GGA3-210ENST00000580799 LINC00303Q3SY05 128 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 MANEAQ5SRI9 462 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 TMEM164Q5U3C3 297 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 DNAJC24Q6P3W2 148 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 MON1BQ7L1V2 547 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 SRLQ86TD4 932 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 DTX1Q86Y01 620 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 CAMK1DQ8IU85 385 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 SLITRK4Q8IW52 837 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 Q8N9G6 341 aaPredicted RBP10.33□□□□□ -0.76
GGA3-210ENST00000580799 NETO2Q8NC67 525 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 PLA2G15Q8NCC3 412 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 KIAA1524Q8TCG1 905 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 EXTL1Q92935 676 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 FUBP1Q96AE4 644 aaKnown RBP10.33□□□□□ -0.76
GGA3-210ENST00000580799 ECHDC3Q96DC8 303 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 PCDHB18PQ96TA0 734 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 VPS16Q9H269 839 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 DPEP2Q9H4A9 486 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 WDR26Q9H7D7 661 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 FGF22Q9HCT0 170 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 NLRC4Q9NPP4 1024 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 KCTD5Q9NXV2 234 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 TAB2Q9NYJ8 693 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 AKAP7Q9P0M2 348 aaPredicted RBP10.33□□□□□ -0.76
GGA3-210ENST00000580799 IL17BQ9UHF5 180 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 PCDHGA4Q9Y5G9 962 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 RNF215Q9Y6U7 377 aa10.33□□□□□ -0.76
GGA3-210ENST00000580799 TCRBV5S1A1TA0A578 114 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 ARHGAP42A6NI28 874 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 B4DGG1 531 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 J3KR12 359 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 BUB1BO60566 1050 aaPredicted RBP10.32□□□□□ -0.76
GGA3-210ENST00000580799 PALMO75781 387 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 CPNE6O95741 557 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 ITIH1P19827 911 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 BCL2L1Q07817 233 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 NSUN2Q08J23 767 aaKnown RBP eCLIP10.32□□□□□ -0.76
GGA3-210ENST00000580799 RALGDSQ12967 914 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 RFTN1Q14699 578 aaPredicted RBP10.32□□□□□ -0.76
GGA3-210ENST00000580799 MAP9Q49MG5 647 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 PHF19Q5T6S3 580 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 CDKAL1Q5VV42 579 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 AFMIDQ63HM1 303 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms