RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 EFL1Q7Z2Z2 1120 aaKnown RBP21.4■■□□□ 1.02
CSNK1D-215ENST00000580784 RD3Q7Z3Z2 195 aa21.4■■□□□ 1.02
CSNK1D-215ENST00000580784 HID1Q8IV36 788 aa21.4■■□□□ 1.02
CSNK1D-215ENST00000580784 MAPK15Q8TD08 544 aa21.4■■□□□ 1.02
CSNK1D-215ENST00000580784 TBATAQ96M53 351 aa21.4■■□□□ 1.02
CSNK1D-215ENST00000580784 DCBLD2Q96PD2 775 aa21.4■■□□□ 1.02
CSNK1D-215ENST00000580784 BOCQ9BWV1 1114 aa21.4■■□□□ 1.02
CSNK1D-215ENST00000580784 NCKIPSDQ9NZQ3 722 aa21.4■■□□□ 1.02
CSNK1D-215ENST00000580784 NENFQ9UMX5 172 aa21.4■■□□□ 1.02
CSNK1D-215ENST00000580784 A0A087WV48 116 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 EME2A4GXA9 379 aaPredicted RBP21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 RECQL5O94762 991 aaPredicted RBP21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 ANXA6P08133 673 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 CD48P09326 243 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 CR2P20023 1033 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 TGM2P21980 687 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 HTR1BP28222 390 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 HK3P52790 923 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 CDH6P55285 790 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 KRT81Q14533 505 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 NFATC4Q14934 902 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 NR0B2Q15466 257 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 TCEA2Q15560 299 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 ALG11Q2TAA5 492 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 ATP13A4Q4VNC1 1196 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 DPPA4Q7L190 304 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 CPNE8Q86YQ8 564 aa21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.39■■□□□ 1.01
CSNK1D-215ENST00000580784 BRINP1O60477 761 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 ELFN1P0C7U0 828 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 GM2AP17900 193 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 PTMSP20962 102 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 HNRNPH3P31942 346 aaKnown RBP21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 BLKP51451 505 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 MAXP61244 160 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 MTM1Q13496 603 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 C6orf132Q5T0Z8 1188 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 KCTD16Q68DU8 428 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 PDZD3Q86UT5 571 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 SLC35F3Q8IY50 421 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 ATPAF2Q8N5M1 289 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 ZNF564Q8TBZ8 553 aaPredicted RBP21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 FAM71BQ8TC56 605 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 PDCD6IPQ8WUM4 868 aaKnown RBP21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 DEPDC7Q96QD5 511 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 NUDCD1Q96RS6 583 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 NOD2Q9HC29 1040 aa21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 COL27A1Q8IZC6 1860 aaPredicted RBP21.38■■□□□ 1.01
CSNK1D-215ENST00000580784 HTRA2O43464 458 aaPredicted RBP21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 CSO75390 466 aaKnown RBP21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 RASGRP1O95267 797 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 CTSEP14091 401 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 SERPINB6P35237 376 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 HSPA9P38646 679 aaKnown RBP21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 SRP54P61011 504 aaKnown RBP21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 HADHQ16836 314 aaKnown RBP21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 PERM1Q5SV97 790 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 MARC1Q5VT66 337 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 CRTC1Q6UUV9 634 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 FSTL5Q8N475 847 aaPredicted RBP21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 GLMNQ92990 594 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 MGME1Q9BQP7 344 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 PACSIN1Q9BY11 444 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 CTTNBP2NLQ9P2B4 639 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 B4GALT6Q9UBX8 382 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 KLQ9UEF7 1012 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 DOLKQ9UPQ8 538 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 IGSF10Q6WRI0 2623 aa21.37■■□□□ 1.01
CSNK1D-215ENST00000580784 CASC3O15234 703 aaKnown RBP21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 SOCS5O75159 536 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 TPM3P06753 285 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 HOXB3P14651 431 aaPredicted RBP21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 GJC1P36383 396 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 EIF2S3P41091 472 aaKnown RBP21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 MMP13P45452 471 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 RPIAP49247 311 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 ARSEP51690 589 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 TRAF2Q12933 501 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 ACOX1Q15067 660 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 ELOCQ15369 112 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 BBS5Q8N3I7 341 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 NSMCE1Q8WV22 266 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 SPOCK2Q92563 424 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 FUBP1Q96AE4 644 aaKnown RBP21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 CRELD1Q96HD1 420 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 WDR92Q96MX6 357 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 RCOR3Q9P2K3 495 aaPredicted RBP21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 GULP1Q9UBP9 304 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 PADI4Q9UM07 663 aa21.36■■□□□ 1.01
CSNK1D-215ENST00000580784 KIF26BQ2KJY2 2108 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 TMEM202A6NGA9 273 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 USP12O75317 370 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 PROSCO94903 275 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 MPOP05164 745 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 ALPIP09923 528 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 ITPKBP27987 946 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 DPYSL3Q14195 570 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 PTPRRQ15256 657 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 ESRP1Q6NXG1 681 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms