RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 TEFMQ96QE5 360 aaKnown RBP7.74□□□□□ -1.17
SMARCE1-217ENST00000580654 USP28Q96RU2 1077 aa7.74□□□□□ -1.17
SMARCE1-217ENST00000580654 TMEM168Q9H0V1 697 aa7.74□□□□□ -1.17
SMARCE1-217ENST00000580654 DPEP2Q9H4A9 486 aa7.74□□□□□ -1.17
SMARCE1-217ENST00000580654 FGF22Q9HCT0 170 aa7.74□□□□□ -1.17
SMARCE1-217ENST00000580654 MLXIPLQ9NP71 852 aa7.74□□□□□ -1.17
SMARCE1-217ENST00000580654 ANLNQ9NQW6 1124 aa7.74□□□□□ -1.17
SMARCE1-217ENST00000580654 SPATS2LQ9NUQ6 558 aaKnown RBP7.74□□□□□ -1.17
SMARCE1-217ENST00000580654 POLHQ9Y253 713 aa7.74□□□□□ -1.17
SMARCE1-217ENST00000580654 FRMD4BQ9Y2L6 1034 aa7.74□□□□□ -1.17
SMARCE1-217ENST00000580654 COQ6Q9Y2Z9 468 aa7.74□□□□□ -1.17
SMARCE1-217ENST00000580654 IGHV1OR21-1A0A087WYE8 117 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 TMEM202A6NGA9 273 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 KRT86O43790 486 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 CBX6O95503 412 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 FGF1P05230 155 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 TIMP2P16035 220 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 HOXB4P17483 251 aaPredicted RBP7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 DNA2P51530 1060 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 MC2RQ01718 297 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 ENPEPQ07075 957 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 SQSTM1Q13501 440 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 SEMA5AQ13591 1074 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 INPP5AQ14642 412 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 NR6A1Q15406 480 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 TAF5Q15542 800 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 CNGA2Q16280 664 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 ZNF805Q5CZA5 627 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 KDELC2Q7Z4H8 507 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 GRAMD1CQ8IYS0 662 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 PATE1Q8WXA2 126 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 RNF31Q96EP0 1072 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 RANBP9Q96S59 729 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 WRAP53Q9BUR4 548 aaKnown RBP7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 TM6SF2Q9BZW4 377 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 CEP44Q9C0F1 390 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 PDP2Q9P2J9 529 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 RCOR3Q9P2K3 495 aaPredicted RBP7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 HECAQ9UBI9 543 aaPredicted RBP7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 ZNF212Q9UDV6 495 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 KIAA1257Q9ULG3 409 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 TRAF3IP3Q9Y228 551 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 SNX10Q9Y5X0 201 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 RPS6KL1Q9Y6S9 549 aa7.73□□□□□ -1.17
SMARCE1-217ENST00000580654 SYNJ2BP-COX16A0A087WUM0 186 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 CDC14CA4D256 554 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 RHPN2P1A8MT19 583 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 PPM1DO15297 605 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 PAGE1O75459 146 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 ADCY5O95622 1261 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 ECEL1O95672 775 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 UGT2B4P06133 528 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 ZNF28P17035 718 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 NR2F2P24468 414 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 HTR1BP28222 390 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 CCR1P32246 355 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 GTF2H1P32780 548 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 DLSTP36957 453 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 GPD2P43304 727 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 GCGRP47871 477 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 LEPRP48357 1165 aaKnown RBP7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 MXI1P50539 228 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 MAP7Q14244 749 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 LRRC14Q15048 493 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 NFIL3Q16649 462 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 ZXDCQ2QGD7 858 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 TMEM52BQ4KMG9 183 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 CBWD6Q4V339 395 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 CBWD3Q5JTY5 395 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 CBWD5Q5RIA9 395 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 PAPD7Q5XG87 772 aaKnown RBP7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 CPZQ66K79 652 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 ANKRD40Q6AI12 368 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 SP5Q6BEB4 398 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 JMJD6Q6NYC1 403 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 SHC4Q6S5L8 630 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 CEACAM20Q6UY09 585 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 SETD3Q86TU7 594 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 NRROSQ86YC3 692 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 IQUBQ8NA54 791 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 PLA2G15Q8NCC3 412 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 CXorf40AQ8TE69 158 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 UBE2Q2Q8WVN8 375 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 NANOS1Q8WY41 292 aaKnown RBP7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 LURAP1Q96LR2 239 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 KLHL32Q96NJ5 620 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 C1QTNF7Q9BXJ2 289 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 SLC29A3Q9BZD2 475 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 TRIT1Q9H3H1 467 aaKnown RBP7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 POPDC2Q9HBU9 364 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 FBXO8Q9NRD0 319 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 RRN3Q9NYV6 651 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 COX16Q9P0S2 106 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 SLC12A6Q9UHW9 1150 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 CROTQ9UKG9 612 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 ITGB1BP2Q9UKP3 347 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 PHTF1Q9UMS5 762 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 SMC3Q9UQE7 1217 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 ST14Q9Y5Y6 855 aa7.72□□□□□ -1.17
SMARCE1-217ENST00000580654 DCHS2Q6V1P9 2916 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms