RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 DNAJC21Q5F1R6 531 aaKnown RBP14.35□□□□□ -0.11
SKA2-205ENST00000580541 HIBCHQ6NVY1 386 aaPredicted RBP14.35□□□□□ -0.11
SKA2-205ENST00000580541 NLRP9Q7RTR0 991 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 AADATQ8N5Z0 425 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 NAT8LQ8N9F0 302 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 OR14C36Q8NHC7 312 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 BRSK1Q8TDC3 778 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 CXorf40AQ8TE69 158 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 SEC14L1Q92503 715 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 LYSMD1Q96S90 227 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 GORASP1Q9BQQ3 440 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 IL22Q9GZX6 179 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 PCED1AQ9H1Q7 454 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 DPH5Q9H2P9 285 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 PREBQ9HCU5 417 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 PCDH12Q9NPG4 1184 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 CASS4Q9NQ75 786 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 RAD18Q9NS91 495 aa14.35□□□□□ -0.11
SKA2-205ENST00000580541 POLR3BQ9NW08 1133 aaPredicted RBP14.35□□□□□ -0.11
SKA2-205ENST00000580541 MTRF1LQ9UGC7 380 aaKnown RBP14.35□□□□□ -0.11
SKA2-205ENST00000580541 TBC1D3DA0A087WVF3 549 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 TBC1D3IA0A087WXS9 549 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 TBC1D3EA0A087X179 549 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 TBC1D3KA0A087X1G2 549 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 TBC1D3FA6NER0 549 aaPredicted RBP14.34□□□□□ -0.11
SKA2-205ENST00000580541 SDR42E2A6NKP2 422 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 TBC1D3LB9A6J9 549 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 MAP3K13O43283 966 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 PLRG1O43660 514 aaKnown RBP14.34□□□□□ -0.11
SKA2-205ENST00000580541 PPFIA2O75334 1257 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 PCDH8O95206 1070 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 RHOXF2BP0C7M4 288 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 TBC1D3HP0C7X1 549 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 CD6P30203 668 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 VIPR1P32241 457 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 CNR2P34972 360 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 DRD3P35462 400 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 TERF1P54274 439 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 ARL4CP56559 192 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 RPS21P63220 83 aaKnown RBP14.34□□□□□ -0.11
SKA2-205ENST00000580541 MRPS25P82663 173 aaKnown RBP14.34□□□□□ -0.11
SKA2-205ENST00000580541 GALNT3Q14435 633 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 IHHQ14623 411 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 FAM182AQ5T1J6 154 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 SYCP2LQ5T4T6 812 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 PIP5KL1Q5T9C9 394 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 ZDHHC20Q5W0Z9 365 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 TBC1D3GQ6DHY5 549 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 TBC1D3CQ6IPX1 549 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 LONP2Q86WA8 852 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 CACUL1Q86Y37 369 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 TBC1D3Q8IZP1 549 aaPredicted RBP14.34□□□□□ -0.11
SKA2-205ENST00000580541 EIF1ADQ8N9N8 165 aaKnown RBP14.34□□□□□ -0.11
SKA2-205ENST00000580541 OR52K1Q8NGK4 314 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 OR2T34Q8NGX1 318 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 FAM131CQ96AQ9 280 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 NSMCE3Q96MG7 304 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 MCCC1Q96RQ3 725 aaPredicted RBP14.34□□□□□ -0.11
SKA2-205ENST00000580541 RHOXF2Q9BQY4 288 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 GPR63Q9BZJ6 419 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 SLC6A17Q9H1V8 727 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 C2orf42Q9NWW7 574 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.34□□□□□ -0.11
SKA2-205ENST00000580541 FADS3Q9Y5Q0 445 aa14.34□□□□□ -0.11
SKA2-205ENST00000580541 HEATR9A2RTY3 570 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 RGSL1A5PLK6 1076 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 CAPN8A6NHC0 703 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 PSMD11O00231 422 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 AREL1O15033 823 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 USP12O75317 370 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 ATXN1LP0C7T5 689 aaKnown RBP14.33□□□□□ -0.12
SKA2-205ENST00000580541 ADRA1DP25100 572 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 HNF1BP35680 557 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 NUDT1P36639 197 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 ABL2P42684 1182 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 PLTPP55058 493 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 SGCGQ13326 291 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 HLTFQ14527 1009 aaKnown RBP eCLIP14.33□□□□□ -0.12
SKA2-205ENST00000580541 TMEM52BQ4KMG9 183 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 AGBL4Q5VU57 503 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 KIAA1161Q6NSJ0 714 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 DPPA4Q7L190 304 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 WDR5BQ86VZ2 330 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 CCNJLQ8IV13 435 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 GPR161Q8N6U8 529 aaKnown RBP14.33□□□□□ -0.12
SKA2-205ENST00000580541 BLOC1S5Q8TDH9 187 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 PTCD2Q8WV60 388 aaKnown RBP14.33□□□□□ -0.12
SKA2-205ENST00000580541 IFT81Q8WYA0 676 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.33□□□□□ -0.121e-8■■■■■ 101.1
SKA2-205ENST00000580541 ART4Q93070 314 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 VOPP1Q96AW1 172 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 LRRC39Q96DD0 335 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 C19orf43Q9BQ61 176 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 APOL2Q9BQE5 337 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 NAT9Q9BTE0 207 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 C1QTNF7Q9BXJ2 289 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 CDH19Q9H159 772 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 ZFYVE1Q9HBF4 777 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 RRAGDQ9NQL2 400 aaPredicted RBP14.33□□□□□ -0.12
SKA2-205ENST00000580541 SAMD15Q9P1V8 674 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms