RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 NT5MQ9NPB1 228 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 TTLL3Q9Y4R7 772 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 K7ESM1 405 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 IPO7O95373 1038 aaKnown RBP20.23■□□□□ 0.83
SMG8-204ENST00000580498 GP1BAP07359 652 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 ZFXP17010 805 aaPredicted RBP20.23■□□□□ 0.83
SMG8-204ENST00000580498 CCNCP24863 283 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 SLC1A1P43005 524 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 EPHB1P54762 984 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 GALNT2Q10471 571 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 NFATC4Q14934 902 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 HES3Q5TGS1 186 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 ESRP1Q6NXG1 681 aaKnown RBP20.23■□□□□ 0.83
SMG8-204ENST00000580498 SDR16C5Q8N3Y7 309 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 APOLD1Q96LR9 279 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 WDR92Q96MX6 357 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 APOOQ9BUR5 198 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 MBNL1Q9NR56 388 aaKnown RBP20.23■□□□□ 0.83
SMG8-204ENST00000580498 SPTLC3Q9NUV7 552 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 KLQ9UEF7 1012 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 SALL4Q9UJQ4 1053 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 DNPEPQ9ULA0 475 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 CLCA2Q9UQC9 943 aa20.23■□□□□ 0.83
SMG8-204ENST00000580498 LRRD1A4D1F6 860 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 TRAFD1O14545 582 aaPredicted RBP20.22■□□□□ 0.83
SMG8-204ENST00000580498 MATN3O15232 486 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 MFSD11O43934 449 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 RECQL5O94762 991 aaPredicted RBP20.22■□□□□ 0.83
SMG8-204ENST00000580498 CD48P09326 243 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 VIPR1P32241 457 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 EIF2B5Q13144 721 aaKnown RBP20.22■□□□□ 0.83
SMG8-204ENST00000580498 INPP5AQ14642 412 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 NR0B2Q15466 257 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 SPA17Q15506 151 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 WSCD2Q2TBF2 565 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 NCBP2-AS2Q69YL0 99 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 ENPP7Q6UWV6 458 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 LIPIQ6XZB0 460 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 VSIG1Q86XK7 387 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 GKN2Q86XP6 184 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 HID1Q8IV36 788 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 TP53INP2Q8IXH6 220 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 CCNYQ8ND76 341 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 SPOCK2Q92563 424 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 VOPP1Q96AW1 172 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 CHP1Q99653 195 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 NOD2Q9HC29 1040 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 DDX56Q9NY93 547 aaKnown RBP20.22■□□□□ 0.83
SMG8-204ENST00000580498 PCDHGC4Q9Y5F7 938 aa20.22■□□□□ 0.83
SMG8-204ENST00000580498 ARID1BQ8NFD5 2236 aaPredicted RBP20.22■□□□□ 0.83
SMG8-204ENST00000580498 FAM149AA5PLN7 773 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 ZNF487B1APH4 448 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 MUSKO15146 869 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 HTRA2O43464 458 aaPredicted RBP20.21■□□□□ 0.83
SMG8-204ENST00000580498 SPOPO43791 374 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 TNFP01375 233 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 PRKCGP05129 697 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 IL4RP24394 825 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 CYLC1P35663 651 aaPredicted RBP20.21■□□□□ 0.83
SMG8-204ENST00000580498 NOP2P46087 812 aaKnown RBP20.21■□□□□ 0.83
SMG8-204ENST00000580498 ARSEP51690 589 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 TAS2R40P59535 323 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 MAXP61244 160 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 BZW1Q7L1Q6 419 aaKnown RBP20.21■□□□□ 0.83
SMG8-204ENST00000580498 RHOT1Q8IXI2 618 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 CACTIN-AS1Q8N1I8 211 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 TPCN2Q8NHX9 752 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 PCDH19Q8TAB3 1148 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 NAT6Q93015 286 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 FATE1Q969F0 183 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 NUS1Q96E22 293 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 TSGA13Q96PP4 275 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 SEMA3CQ99985 751 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 RBM22Q9NW64 420 aaKnown RBP eCLIP20.21■□□□□ 0.83
SMG8-204ENST00000580498 B4GALT6Q9UBX8 382 aa20.21■□□□□ 0.83
SMG8-204ENST00000580498 TRABD2BA6NFA1 517 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 LMO7DNF2Z398 122 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 PSMD11O00231 422 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 MTA2O94776 668 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 KRT1P04264 644 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 CR2P20023 1033 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 KDELR1P24390 212 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 HK3P52790 923 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 DEFB133Q30KQ1 61 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 ATP13A4Q4VNC1 1196 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 LRRC38Q5VT99 294 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 LVRNQ6Q4G3 990 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 ZSWIM9Q86XI8 627 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 PROSER1Q86XN7 944 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 TEX26Q8N6G2 289 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 WDR48Q8TAF3 677 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 DEPDC7Q96QD5 511 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 WDR26Q9H7D7 661 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 PHPT1Q9NRX4 125 aaPredicted RBP20.2■□□□□ 0.82
SMG8-204ENST00000580498 AK5Q9Y6K8 562 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 KNTC1P50748 2209 aa20.2■□□□□ 0.82
SMG8-204ENST00000580498 PLXNB3Q9ULL4 1909 aa20.19■□□□□ 0.82
SMG8-204ENST00000580498 LRRK1Q38SD2 2015 aa20.19■□□□□ 0.82
SMG8-204ENST00000580498 APOL1O14791 398 aa20.19■□□□□ 0.82
SMG8-204ENST00000580498 PPP1R12AO14974 1030 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms