RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 VPS28Q9UK41 221 aa13.65□□□□□ -0.22
TRAPPC8-207ENST00000580104 GNG14A0A1W2PPG7 69 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 HCRTO43612 131 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 GRIN3BO60391 1043 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 CNOT3O75175 753 aaKnown RBP13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 YAP1P46937 504 aaKnown RBP13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 RHOAP61586 193 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 RPL38P63173 70 aaKnown RBP13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 MRPL28Q13084 256 aaKnown RBP13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 TRAF3Q13114 568 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 MAPKAPK3Q16644 382 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 RAB6CQ53S08 254 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 HECTD2Q5U5R9 776 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 RPS27LQ71UM5 84 aaKnown RBP13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 OSBPL6Q9BZF3 934 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 POLR1EQ9GZS1 481 aaKnown RBP13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 RAB6CQ9H0N0 254 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 ATP13A1Q9HD20 1204 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 ZDHHC2Q9UIJ5 367 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 LRIG2O94898 1065 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 FAM35AQ86V20 835 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 LGI2Q8N0V4 545 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 PLD6Q8N2A8 252 aaKnown RBP13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 ZFP42Q96MM3 310 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 ADI1Q9BV57 179 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 GBA2Q9HCG7 927 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 SMIM28A0A1B0GU29 152 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 KCNH1O95259 989 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 DBTP11182 482 aaKnown RBP13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 PRKCHP24723 683 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 MTTPP55157 894 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 CCDC142Q17RM4 750 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 ARMC4Q5T2S8 1044 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 ADHFE1Q8IWW8 467 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 CANT1Q8WVQ1 401 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 NRG4Q8WWG1 115 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 PARK7Q99497 189 aaKnown RBP13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 GBA3Q9H227 469 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 C1orf21Q9H246 121 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 USE1Q9NZ43 259 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 SH3BP4Q9P0V3 963 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 ZNHIT2Q9UHR6 403 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 ATRNL1Q5VV63 1379 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 A0A088AWK7 358 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 A6NHS1 94 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 SORBS2O94875 1100 aaKnown RBP13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 NTRK1P04629 796 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 CHRNA4P43681 627 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 PIK3CGP48736 1102 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 SNX17Q15036 470 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 STXBP5Q5T5C0 1151 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 TMEM214Q6NUQ4 689 aaKnown RBP13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 ADCK2Q7Z695 626 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 WDTC1Q8N5D0 677 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 MYLPFQ96A32 169 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 ESAMQ96AP7 390 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 APOL4Q9BPW4 351 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 CCDC106Q9BWC9 280 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 ADGRE3Q9BY15 652 aa13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 COPG1Q9Y678 874 aaKnown RBP13.64□□□□□ -0.23
TRAPPC8-207ENST00000580104 GPR182O15218 404 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 RAD51BO15315 384 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 SLC22A3O75751 556 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 NADKO95544 446 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 ITGALP20701 1170 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 S100A3P33764 101 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 MFSD10Q14728 455 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 DPYSL2Q16555 572 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 MFSD14CQ5VZR4 134 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 NCBP2-AS2Q69YL0 99 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 TRIM74Q86UV6 250 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 TRIM73Q86UV7 250 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 PQLC3Q8N755 202 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 POC5Q8NA72 575 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 ZNF540Q8NDQ6 660 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 SETD9Q8NE22 299 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 CRYGNQ8WXF5 182 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 MTERF3Q96E29 417 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 SMPD4Q9NXE4 827 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 ZNF214Q9UL59 606 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 KRT6AP02538 564 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 KRT6BP04259 564 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 KRT6CP48668 564 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 ARHGAP17Q68EM7 881 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 FAM117BQ6P1L5 589 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 PLEKHH3Q7Z736 793 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 HPS1Q92902 700 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 EPB41L1Q9H4G0 881 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 FANCEQ9HB96 536 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 ABCC13Q9NSE7 274 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 TEKT2Q9UIF3 430 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 E7ENX8 843 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 FGF3P11487 239 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 IDO1P14902 403 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 NNMTP40261 264 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 CBX3Q13185 183 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 GLYATQ6IB77 296 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 OR9I1Q8NGQ6 314 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 TWIST2Q8WVJ9 160 aa13.63□□□□□ -0.23
TRAPPC8-207ENST00000580104 CDCA5Q96FF9 252 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms