RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 PCDH12Q9NPG4 1184 aa15.98■□□□□ 0.15
CSNK1D-212ENST00000580061 NUMA1Q14980 2115 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 SCN8AQ9UQD0 1980 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 CAPN8A6NHC0 703 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 PRR33A8MZF0 331 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 GOLGA8MH3BSY2 632 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 AP3B1O00203 1094 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 AREL1O15033 823 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 SPINT1O43278 529 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 HNF1BP35680 557 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 TAS2R38P59533 333 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 MSLNQ13421 630 aaPredicted RBP15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 PTPRRQ15256 657 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 TSSK4Q6SA08 328 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 USP45Q70EL2 814 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 CAND1Q86VP6 1230 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 DNAAF3Q8N9W5 541 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 ART4Q93070 314 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 SERPINB12Q96P63 405 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 LYSMD1Q96S90 227 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 GDF3Q9NR23 364 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 FAM114A2Q9NRY5 505 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 PIH1D1Q9NWS0 290 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 FADS3Q9Y5Q0 445 aa15.97■□□□□ 0.15
CSNK1D-212ENST00000580061 CCDC163A0A0D9SF12 145 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 NPIPB15A6NHN6 443 aaPredicted RBP15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 AXIN1O15169 862 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 PLRG1O43660 514 aaKnown RBP15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 AP1G1O43747 822 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 ZNF217O75362 1048 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 PIRTP0C851 137 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 MLNP12872 115 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 NFKBIAP25963 317 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 MMP12P39900 470 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 ADPRHP54922 357 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 PLTPP55058 493 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 FAM193AP78312 1265 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 SEMG2Q02383 582 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 CAV1Q03135 178 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 DMWDQ09019 674 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 ELP6Q0PNE2 266 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 ERAP2Q6P179 960 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 ZDHHC24Q6UX98 284 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 DPPA4Q7L190 304 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 IFT20Q8IY31 132 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 UBXN4Q92575 508 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 FRMD8Q9BZ67 464 aaPredicted RBP15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 EPC1Q9H2F5 836 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 MAGEE1Q9HCI5 957 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 XAB2Q9HCS7 855 aaKnown RBP15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 B4GALT6Q9UBX8 382 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 FBXO4Q9UKT5 387 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 ITM2BQ9Y287 266 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 SPO11Q9Y5K1 396 aa15.96■□□□□ 0.15
CSNK1D-212ENST00000580061 CEP192Q8TEP8 1941 aa15.96■□□□□ 0.14
CSNK1D-212ENST00000580061 AVILO75366 819 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 CYP2A6P11509 494 aaPredicted RBP15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 TPH1P17752 444 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 LHCGRP22888 699 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 OXTRP30559 389 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 VIPR1P32241 457 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 ACSL1P33121 698 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 MAGEA3P43357 314 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 RALGDSQ12967 914 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 CDKN3Q16667 212 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 MAP7D1Q3KQU3 841 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 TMEM31Q5JXX7 168 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 CERCAMQ5T4B2 595 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 CRTC1Q6UUV9 634 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 FAM124AQ86V42 546 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 OR14C36Q8NHC7 312 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 FBXO25Q8TCJ0 367 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 BLOC1S5Q8TDH9 187 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 SRPK1Q96SB4 655 aaKnown RBP15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 BTBD1Q9H0C5 482 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 KDM4CQ9H3R0 1056 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 ANKZF1Q9H8Y5 726 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 SGK2Q9HBY8 427 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 ZDHHC18Q9NUE0 388 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 HACD3Q9P035 362 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.95■□□□□ 0.143e-8■□□□□ 9.7
CSNK1D-212ENST00000580061 GGT7Q9UJ14 662 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 CYP8B1Q9UNU6 501 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 V9GYY5 206 aaPredicted RBP15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 DOCK9Q9BZ29 2069 aa15.95■□□□□ 0.14
CSNK1D-212ENST00000580061 TRPM6Q9BX84 2022 aa15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 IGHV1OR15-9A0A0B4J2B8 117 aa15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 A8MX80 341 aa15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 TSPAN6O43657 245 aa15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 PPFIA2O75334 1257 aa15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 NPY2RP49146 381 aa15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 CARSP49589 748 aaKnown RBP15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 SESN2P58004 480 aaPredicted RBP15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 CSTF1Q05048 431 aaKnown RBP15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 MTM1Q13496 603 aa15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 CUL1Q13616 776 aa15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 ERCC6LQ2NKX8 1250 aa15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 TMEM52BQ4KMG9 183 aa15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 FNBP1LQ5T0N5 605 aa15.94■□□□□ 0.14
CSNK1D-212ENST00000580061 TSPAN33Q86UF1 283 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms