RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 LUC7L2Q9Y383 392 aaKnown RBP11.61□□□□□ -0.55
SSH2-208ENST00000579040 IGSF10Q6WRI0 2623 aa11.61□□□□□ -0.55
SSH2-208ENST00000579040 A0A087X0T9 212 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 CPED1A4D0V7 1026 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 MUSKO15146 869 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 RRP8O43159 456 aaKnown RBP11.6□□□□□ -0.55
SSH2-208ENST00000579040 TLX3O43711 291 aaPredicted RBP11.6□□□□□ -0.55
SSH2-208ENST00000579040 CSO75390 466 aaKnown RBP11.6□□□□□ -0.55
SSH2-208ENST00000579040 TCEA3O75764 348 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 DXOO77932 396 aaKnown RBP11.6□□□□□ -0.55
SSH2-208ENST00000579040 RECQL5O94762 991 aaPredicted RBP11.6□□□□□ -0.55
SSH2-208ENST00000579040 FAM228BP0C875 321 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 RARAP10276 462 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 MYF5P13349 255 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 TCF4P15884 667 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 TSHRP16473 764 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 AMPD1P23109 780 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 KIAA1024LP59773 190 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 SLC25A11Q02978 314 aaKnown RBP11.6□□□□□ -0.55
SSH2-208ENST00000579040 SLC10A7Q0GE19 358 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 INPP5AQ14642 412 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 ALG11Q2TAA5 492 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 TBC1D25Q3MII6 688 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 RALGPS1Q5JS13 557 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 ESRP1Q6NXG1 681 aaKnown RBP11.6□□□□□ -0.55
SSH2-208ENST00000579040 GUSBP11Q6P575 273 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 ALKBH5Q6P6C2 394 aaKnown RBP11.6□□□□□ -0.55
SSH2-208ENST00000579040 EFL1Q7Z2Z2 1120 aaKnown RBP11.6□□□□□ -0.55
SSH2-208ENST00000579040 LRRC49Q8IUZ0 686 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 SLC35F3Q8IY50 421 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 LSMEM2Q8N112 164 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 ATPAF2Q8N5M1 289 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 NSMCE1Q8WV22 266 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 WDR92Q96MX6 357 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 DCBLD2Q96PD2 775 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 MGME1Q9BQP7 344 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 CLPBQ9H078 707 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 PCDH18Q9HCL0 1135 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 KCTD5Q9NXV2 234 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 KLQ9UEF7 1012 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 DOLKQ9UPQ8 538 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 PCDHB1Q9Y5F3 818 aa11.6□□□□□ -0.55
SSH2-208ENST00000579040 ZFC3H1O60293 1989 aaKnown RBP11.59□□□□□ -0.55
SSH2-208ENST00000579040 MYO1FO00160 1098 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 TNFRSF10CO14798 259 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 YY2O15391 372 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 HTRA2O43464 458 aaPredicted RBP11.59□□□□□ -0.55
SSH2-208ENST00000579040 MAFKO60675 156 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 USP12O75317 370 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 PEX11BO96011 259 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 GYPCP04921 128 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 PRKCGP05129 697 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 PCCBP05166 539 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 TPM3P06753 285 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 HOXC4P09017 264 aaPredicted RBP11.59□□□□□ -0.55
SSH2-208ENST00000579040 CTSEP14091 401 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 CR2P20023 1033 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 TGM2P21980 687 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 KELP23276 732 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 LSSP48449 732 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 CDH6P55285 790 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 SRP54P61011 504 aaKnown RBP11.59□□□□□ -0.55
SSH2-208ENST00000579040 C1orf61Q13536 156 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 HADHQ16836 314 aaKnown RBP11.59□□□□□ -0.55
SSH2-208ENST00000579040 ISXQ2M1V0 245 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 IGF2-ASQ6U949 168 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 ENPP7Q6UWV6 458 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 GKN2Q86XP6 184 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 HID1Q8IV36 788 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 TP53INP2Q8IXH6 220 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 ARL10Q8N8L6 244 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 FAM71BQ8TC56 605 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 CPLX3Q8WVH0 158 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 ZNF578Q96N58 590 aaPredicted RBP11.59□□□□□ -0.55
SSH2-208ENST00000579040 NUDCD1Q96RS6 583 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 POLR1BQ9H9Y6 1135 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 ETNK2Q9NVF9 386 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 IFNKQ9P0W0 207 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 LCMT1Q9UIC8 334 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 PADI4Q9UM07 663 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 OR1A2Q9Y585 309 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.59□□□□□ -0.55
SSH2-208ENST00000579040 DGKBQ9Y6T7 804 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 WDFY3Q8IZQ1 3526 aa11.59□□□□□ -0.55
SSH2-208ENST00000579040 CACNB4O00305 520 aaPredicted RBP11.58□□□□□ -0.56
SSH2-208ENST00000579040 CPP00450 1065 aa11.58□□□□□ -0.56
SSH2-208ENST00000579040 TNFP01375 233 aa11.58□□□□□ -0.56
SSH2-208ENST00000579040 HNRNPH3P31942 346 aaKnown RBP11.58□□□□□ -0.56
SSH2-208ENST00000579040 TRIM23P36406 574 aa11.58□□□□□ -0.56
SSH2-208ENST00000579040 MMP13P45452 471 aa11.58□□□□□ -0.56
SSH2-208ENST00000579040 ERVPABLB-1P60509 514 aa11.58□□□□□ -0.56
SSH2-208ENST00000579040 GABREP78334 506 aa11.58□□□□□ -0.56
SSH2-208ENST00000579040 KRT81Q14533 505 aa11.58□□□□□ -0.56
SSH2-208ENST00000579040 NFKBIBQ15653 356 aa11.58□□□□□ -0.56
SSH2-208ENST00000579040 PERM1Q5SV97 790 aa11.58□□□□□ -0.56
SSH2-208ENST00000579040 CCDC122Q5T0U0 273 aa11.58□□□□□ -0.56
SSH2-208ENST00000579040 MARC1Q5VT66 337 aa11.58□□□□□ -0.56
SSH2-208ENST00000579040 TXNRD3NBQ6F5E7 133 aa11.58□□□□□ -0.56
SSH2-208ENST00000579040 RBM44Q6ZP01 1051 aaKnown RBP11.58□□□□□ -0.56
SSH2-208ENST00000579040 OR6C4Q8NGE1 309 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms