RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 DOLKQ9UPQ8 538 aa15.97■□□□□ 0.15
CRLF3-203ENST00000578692 OR1A2Q9Y585 309 aa15.97■□□□□ 0.15
CRLF3-203ENST00000578692 ACACAQ13085 2346 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 A8MX80 341 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 RRP8O43159 456 aaKnown RBP15.96■□□□□ 0.15
CRLF3-203ENST00000578692 MAFKO60675 156 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 CSO75390 466 aaKnown RBP15.96■□□□□ 0.15
CRLF3-203ENST00000578692 RECQL5O94762 991 aaPredicted RBP15.96■□□□□ 0.15
CRLF3-203ENST00000578692 RASGRP1O95267 797 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 PEX11BO96011 259 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 ELFN1P0C7U0 828 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 HOXB3P14651 431 aaPredicted RBP15.96■□□□□ 0.15
CRLF3-203ENST00000578692 ACTN2P35609 894 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 HSPA9P38646 679 aaKnown RBP15.96■□□□□ 0.15
CRLF3-203ENST00000578692 ABCG1P45844 678 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 SRP54P61011 504 aaKnown RBP15.96■□□□□ 0.15
CRLF3-203ENST00000578692 SLC25A11Q02978 314 aaKnown RBP15.96■□□□□ 0.15
CRLF3-203ENST00000578692 RALGDSQ12967 914 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 ALG11Q2TAA5 492 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 ESRP1Q6NXG1 681 aaKnown RBP15.96■□□□□ 0.15
CRLF3-203ENST00000578692 DPPA4Q7L190 304 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 SLC35F3Q8IY50 421 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 BBS5Q8N3I7 341 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 PLA2G15Q8NCC3 412 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 ATL2Q8NHH9 583 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 SCG3Q8WXD2 468 aaKnown RBP15.96■□□□□ 0.15
CRLF3-203ENST00000578692 NUDCD1Q96RS6 583 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 PCDH18Q9HCL0 1135 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 PCDHGC4Q9Y5F7 938 aa15.96■□□□□ 0.15
CRLF3-203ENST00000578692 FAM208BQ5VWN6 2430 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 APC2O95996 2303 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 A0A1W2PQ67 120 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 USP12O75317 370 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 TNFP01375 233 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 GYPCP04921 128 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 ALPIP09923 528 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 CR2P20023 1033 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 ITPKBP27987 946 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 CASP14P31944 242 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 SERPINB6P35237 376 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 SSR1P43307 286 aaKnown RBP15.95■□□□□ 0.14
CRLF3-203ENST00000578692 CDH6P55285 790 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 HADHQ16836 314 aaKnown RBP15.95■□□□□ 0.14
CRLF3-203ENST00000578692 PERM1Q5SV97 790 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 LVRNQ6Q4G3 990 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 SDR16C5Q8N3Y7 309 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 PGBD5Q8N414 524 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 SNIP1Q8TAD8 396 aaKnown RBP15.95■□□□□ 0.14
CRLF3-203ENST00000578692 NSMCE1Q8WV22 266 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 WDR92Q96MX6 357 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 KLQ9UEF7 1012 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 PADI4Q9UM07 663 aa15.95■□□□□ 0.14
CRLF3-203ENST00000578692 CELSR3Q9NYQ7 3312 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 ANKRD11Q6UB99 2663 aaPredicted RBP15.94■□□□□ 0.14
CRLF3-203ENST00000578692 HTRA2O43464 458 aaPredicted RBP15.94■□□□□ 0.14
CRLF3-203ENST00000578692 SOCS5O75159 536 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 MPOP05164 745 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 CELA2BP08218 269 aaPredicted RBP15.94■□□□□ 0.14
CRLF3-203ENST00000578692 PTMSP20962 102 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 IL4RP24394 825 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 KRT81Q14533 505 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 ACOX1Q15067 660 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 ISXQ2M1V0 245 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 TBC1D25Q3MII6 688 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 MARC1Q5VT66 337 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 CRTC1Q6UUV9 634 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 NYAP1Q6ZVC0 841 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 GKN2Q86XP6 184 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 LSMEM2Q8N112 164 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 ATPAF2Q8N5M1 289 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 PDCD6IPQ8WUM4 868 aaKnown RBP15.94■□□□□ 0.14
CRLF3-203ENST00000578692 SPOCK2Q92563 424 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 NAT6Q93015 286 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 FUBP1Q96AE4 644 aaKnown RBP15.94■□□□□ 0.14
CRLF3-203ENST00000578692 NOD2Q9HC29 1040 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 GULP1Q9UBP9 304 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 B4GALT6Q9UBX8 382 aa15.94■□□□□ 0.14
CRLF3-203ENST00000578692 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.94■□□□□ 0.14
CRLF3-203ENST00000578692 DSPP15924 2871 aaKnown RBP15.94■□□□□ 0.14
CRLF3-203ENST00000578692 CACNB4O00305 520 aaPredicted RBP15.93■□□□□ 0.14
CRLF3-203ENST00000578692 GM2AP17900 193 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 TRIM23P36406 574 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 MMP13P45452 471 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 LSSP48449 732 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 MAXP61244 160 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 GABREP78334 506 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 MMRN1Q13201 1228 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 TCEA2Q15560 299 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 RALGPS1Q5JS13 557 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 LRRC49Q8IUZ0 686 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 OR56A4Q8NGH8 313 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 ZNF564Q8TBZ8 553 aaPredicted RBP15.93■□□□□ 0.14
CRLF3-203ENST00000578692 FAM71BQ8TC56 605 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 GRAMD1AQ96CP6 724 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 CRELD1Q96HD1 420 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 ZNF578Q96N58 590 aaPredicted RBP15.93■□□□□ 0.14
CRLF3-203ENST00000578692 MGME1Q9BQP7 344 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 XPO4Q9C0E2 1151 aaKnown RBP15.93■□□□□ 0.14
CRLF3-203ENST00000578692 POLR1BQ9H9Y6 1135 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 RCOR3Q9P2K3 495 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms